Succession patterns of the bacterial community in poultry litter after bird removal and sodium bisulfate application. Issue 4 (15th June 2021)

• Record Type: Journal Article
• Authors: Johnson, Jasmine; Zwirzitz, Benjamin; Oladeinde, Adelumola; Milfort, Marie; Looft, Torey; Chai, Lilong; Zock, Gregory; Sommers, Marlo; Tunim, Supanon; Aggrey, Samuel E.
• Is Part Of: Journal of Environmental Quality. Volume 50:Issue 4(2021)
• Page Start: 923
• Page End: 933
• Publication Date: 2021-06-15
• Subjects: Agricultural ecology -- Periodicals; Environmental engineering -- Periodicals; Pollution -- Periodicals; 630
• DOI: 10.1002/jeq2.20248
• Languages: English
• ISSNs: 0047-2425

Abstract

Abstract: Sulfate‐based acid amendments are used for treating litter between broiler chicken flocks and during grow‐out for in‐house ammonia abatement. These amendments reduce litter pH and inhibit ammonia volatilization by converting ammonia to nonvolatile ammonium. Research on the effects of acid amendments on litter microbiota is limited and usually done in microcosms, which do not replicate natural environments. In this study, we determined the changes in bacterial populations present in litter during downtime (the period after a flock was removed and before new broiler chicks were placed) and 24 h before and after the application of a sodium bisulfate (NaHSO4 )‐based amendment. We used DNA sequencing technologies to characterize the litter microbiota, elucidating microbial shifts in litter samples with respect to downtime, litter depth, and NaHSO4 application. During downtime (∼18 d), the litter microbiota was dominated by Actinobacteria, Bacteroidetes, Firmicutes, and Proteobacteria. Sodium bisulfate affected the microbiota in the top layer (3 cm) of reused litter topdressed with fresh pine shavings and resulted in an increase in Escherichia spp. and Faecalibacterium spp. and a decrease in members of the phylum Acidobacteria. Furthermore, culturable Escherichia coli decreased by 1.5 log units during downtime, but an increase was observed for topdressed litter after NaHSO4 was applied. Although the effect of acidifiers on ammonia reduction, bird performance, and litter performance are well documented, their effect on litter bacteria is not well understood. Our results suggest that acidifiers may perturb litter bacteria when topdressed with fresh pine shavings and that further research is required. Core Ideas: Bacterial community present in litter during downtime was stable for a duration of 19 d. Topdressing and addition of an acidifier perturbed the bacterial community in reused litter. E. coli population decreased by 1.5 logs during downtime. E. coli population increased after topdressing and acidifier application.