Diel cycling of the cosmopolitan abundant Pelagibacter virus 37‐F6: one of the most abundant viruses on earth. Issue 2 (7th February 2020)

• Record Type: Journal Article
• Authors: Martinez‐Hernandez, Francisco; Luo, Elaine; Tominaga, Kento; Ogata, Hiroyuki; Yoshida, Takashi; DeLong, Edward F.; Martinez‐Garcia, Manuel
• Is Part Of: Environmental microbiology reports. Volume 12:Issue 2(2020)
• Page Start: 214
• Page End: 219
• Publication Date: 2020-02-07
• Subjects: Microbial ecology -- Periodicals; Environmental Microbiology -- Periodicals; Electronic journals; 579.17
• DOI: 10.1111/1758-2229.12825
• Languages: English
• ISSNs: 1758-2229

Abstract

Summary: The spatiotemporal dynamics for marine viral populations has only recently been explored. However, nothing is known about temporal activities of the uncultured Pelagibacter virus vSAG 37‐F6, which was discovered by single‐virus genomics as potentially the most abundant marine virus. Here, we investigate the diel cycling of 37‐F6 virus and the putative SAR11 host using coastal and oceanic transcriptomic and viromic time‐series data from Osaka Bay and North Pacific Subtropical Gyre. Virus 37‐F6 and relatives displayed diel cycling of transcriptional activities synchronized with its putative host. In both virus and host, the lowest transcription rates were observed at 14:00–15:00, coinciding roughly with maximum solar irradiance, while higher transcriptional rates were detected during the night/early morning and afternoon. Diel abundance of free viruses of 37‐F6 in seawater roughly mirrored the transcriptional activities of both virus and host. In Osaka Bay, among viral relatives (genus level), virus 37‐F6 specifically showed the highest ratio of transcriptional activity to virome abundance, a proxy for viral transcriptional activity relative to free viral particle abundance. This high ratio suggests high infection rate efficiencies in vSAG 37‐F6 virus compared to viral relatives. Thus, time‐series data revealed temporal transcript activities in one of the most abundant viruses in Earth.