The complete chloroplast genome sequence of Hippophae rhamnoides subsp. sinensis. Issue 1 (2nd January 2020)

• Record Type: Journal Article
• Authors: Diao, Songfeng; Zhang, Guoyun; He, Caiyun; Duan, Aiguo; Zhang, Jianguo
• Is Part Of: Mitochondrial DNA. Volume 5:Issue 1(2020)
• Page Start: 982
• Page End: 983
• Publication Date: 2020-01-02
• Subjects: Hippophae rahmnoides subsp. sinensis -- chloroplast genome -- phylogenetic analysis -- genetic information; Mitochondrial DNA -- Periodicals; 572.869
• DOI: 10.1080/23802359.2020.1719932
• Languages: English
• ISSNs: 2380-2359

Abstract

Abstract: The complete chloroplast genome sequence of Hippophae rahmnoides subsp. sinensis was characterized from Illumina pair-end sequencing. The chloroplast genome of H. rahmnoides subsp. sinensis was 156, 355 bp in length, containing a large single-copy region (LSC) of 84, 002 bp, a small single-copy region (SSC) of 19, 055 bp, and two inverted repeat (IR) regions of 26, 649 bp. The overall GC content is 36.6%, while the corresponding values of the LSC, SSC, and IR regions are 64.5%, 69.2%, and 60.1%, respectively. The genome contains 131 complete genes, including 88 protein-coding genes, 38 tRNA genes (29 tRNA species), and 8 rRNA genes (4 rRNA species). The neighbour-joining phylogenetic analysis showed that H. rahmnoides subsp. sinensis and H. rahmnoides clustered together as sisters to other H. rahmnoides species.