A systems biology approach to investigate the antimicrobial activity of oleuropein. (1st December 2016)
- Record Type:
- Journal Article
- Title:
- A systems biology approach to investigate the antimicrobial activity of oleuropein. (1st December 2016)
- Main Title:
- A systems biology approach to investigate the antimicrobial activity of oleuropein
- Authors:
- Li, Xianhua
Liu, Yanhong
Jia, Qian
LaMacchia, Virginia
O'Donoghue, Kathryn
Huang, Zuyi - Abstract:
- Abstract: Oleuropein and its hydrolysis products are olive phenolic compounds that have antimicrobial effects on a variety of pathogens, with the potential to be utilized in food and pharmaceutical products. While the existing research is mainly focused on individual genes or enzymes that are regulated by oleuropein for antimicrobial activities, little work has been done to integrate intracellular genes, enzymes and metabolic reactions for a systematic investigation of antimicrobial mechanism of oleuropein. In this study, the first genome-scale modeling method was developed to predict the system-level changes of intracellular metabolism triggered by oleuropein in Staphylococcus aureus, a common food-borne pathogen. To simulate the antimicrobial effect, an existing S. aureus genome-scale metabolic model was extended by adding the missing nitric oxide reactions, and exchange rates of potassium, phosphate and glutamate were adjusted in the model as suggested by previous research to mimic the stress imposed by oleuropein on S. aureus . The developed modeling approach was able to match S. aureus growth rates with experimental data for five oleuropein concentrations. The reactions with large flux change were identified and the enzymes of fifteen of these reactions were validated by existing research for their important roles in oleuropein metabolism. When compared with experimental data, the up/down gene regulations of 80% of these enzymes were correctly predicted by our modelingAbstract: Oleuropein and its hydrolysis products are olive phenolic compounds that have antimicrobial effects on a variety of pathogens, with the potential to be utilized in food and pharmaceutical products. While the existing research is mainly focused on individual genes or enzymes that are regulated by oleuropein for antimicrobial activities, little work has been done to integrate intracellular genes, enzymes and metabolic reactions for a systematic investigation of antimicrobial mechanism of oleuropein. In this study, the first genome-scale modeling method was developed to predict the system-level changes of intracellular metabolism triggered by oleuropein in Staphylococcus aureus, a common food-borne pathogen. To simulate the antimicrobial effect, an existing S. aureus genome-scale metabolic model was extended by adding the missing nitric oxide reactions, and exchange rates of potassium, phosphate and glutamate were adjusted in the model as suggested by previous research to mimic the stress imposed by oleuropein on S. aureus . The developed modeling approach was able to match S. aureus growth rates with experimental data for five oleuropein concentrations. The reactions with large flux change were identified and the enzymes of fifteen of these reactions were validated by existing research for their important roles in oleuropein metabolism. When compared with experimental data, the up/down gene regulations of 80% of these enzymes were correctly predicted by our modeling approach. This study indicates that the genome-scale modeling approach provides a promising avenue for revealing the intracellular metabolism of oleuropein antimicrobial properties. … (more)
- Is Part Of:
- Journal of industrial microbiology & biotechnology. Volume 43:Number 12(2016)
- Journal:
- Journal of industrial microbiology & biotechnology
- Issue:
- Volume 43:Number 12(2016)
- Issue Display:
- Volume 43, Issue 12 (2016)
- Year:
- 2016
- Volume:
- 43
- Issue:
- 12
- Issue Sort Value:
- 2016-0043-0012-0000
- Page Start:
- 1705
- Page End:
- 1717
- Publication Date:
- 2016-12-01
- Subjects:
- Exchange Rate -- Flux Balance Analysis -- Oleuropein -- Hydroxytyrosol -- Antimicrobial Mechanism
Industrial microbiology -- Periodicals
660.62 - Journal URLs:
- http://www.springerlink.com/content/100967/ ↗
https://academic.oup.com/jimb ↗
http://www.springer.com/gb/ ↗
http://www.nature.com/jim/ ↗ - DOI:
- 10.1007/s10295-016-1841-8 ↗
- Languages:
- English
- ISSNs:
- 1367-5435
- Deposit Type:
- Legaldeposit
- View Content:
- Available online (eLD content is only available in our Reading Rooms) ↗
- Physical Locations:
- British Library DSC - 5006.330500
British Library DSC - BLDSS-3PM
British Library HMNTS - ELD Digital store - Ingest File:
- 17186.xml