An atomistic view of solvent-free protein liquids: the case of Lipase A. Issue 12 (22nd March 2021)

• Record Type: Journal Article
• Authors: Behera, Sudarshan; Das, Sudip; Balasubramanian, Sundaram
• Is Part Of: Physical chemistry chemical physics. Volume 23:Issue 12(2021)
• Page Start: 7302
• Page End: 7312
• Publication Date: 2021-03-22
• Subjects: Chemistry, Physical and theoretical -- Periodicals; 541.3
• DOI: 10.1039/d0cp05964a
• Languages: English
• ISSNs: 1463-9076

Abstract

Abstract : Atomistic MD simulations of anhydrous surfactant-coated protein liquids reveal their intermolecular structure. Inter-surfactant interactions stabilize the liquid state. Dynamics of trace amounts of water offer clues on enhancing the activity. Abstract : Solvent-free enzymes hold the promise of being able to deliver higher activity at elevated temperatures by virtue of them being not limited by the boiling point of the solvent. They have been realized in the liquid phase through a polymer surfactant coating on the protein surface. However, a clear understanding of intermolecular interactions, structure, dynamics, and the behaviour of the minuscule amount of water present in the solvent-free protein liquid is essential to enhance the activity of these biofluids. Using atomistic molecular dynamics simulations, we demonstrate that the scaled spatial correlations between proteins in the hybrid liquid phase of Lipase A enzymes are comparable to the inter-particle correlations in a noble gas fluid. The hydrophilic region of the surfactants forms a coronal layer around each enzyme which percolates throughout the liquid, while the hydrophobic parts are present as disjointed clusters. Inter-surfactant interactions, determined to be attractive and in the range of −200 to −300 kcal mol −1, stabilize the liquid state. While the protein retains its native state conformational dynamics in the solvent-free form, the fluxionality of its side chains is much reduced; at 333 K, the latter is found to be equivalent to that of the enzyme in an aqueous solution at 249 K. Despite the sluggishness of the solvent-free enzyme, some water molecules exhibit high mobility and transit between enzymes primarily via the interspersed hydrophilic regions. These microscopic insights offer ideas to improve substrate diffusion in the liquid to enable the enhancement of catalytic activity.