Integration of Architectural and Cytologic Driven Image Algorithms for Prostate Adenocarcinoma Identification. (2012)
- Record Type:
- Journal Article
- Title:
- Integration of Architectural and Cytologic Driven Image Algorithms for Prostate Adenocarcinoma Identification. (2012)
- Main Title:
- Integration of Architectural and Cytologic Driven Image Algorithms for Prostate Adenocarcinoma Identification
- Authors:
- Hipp, Jason
Monaco, James
Kunju, L. Priya
Cheng, Jerome
Yagi, Yukako
Rodriguez-Canales, Jaime
Emmert-Buck, Michael R.
Hewitt, Stephen
Feldman, Michael D.
Tomaszewski, John E.
Toner, Mehmet
Tompkins, Ronald G.
Flotte, Thomas
Lucas, David
Gilbertson, John R.
Madabhushi, Anant
Balis, Ulysses - Abstract:
- Abstract : Introduction : The advent of digital slides offers new opportunities within the practice of pathology such as the use of image analysis techniques to facilitate computer aided diagnosis (CAD) solutions. Use of CAD holds promise to enable new levels of decision support and allow for additional layers of quality assurance and consistency in rendered diagnoses. However, the development and testing of prostate cancer CAD solutions requires a ground truth map of the cancer to enable the generation of receiver operator characteristic (ROC) curves. This requires a pathologist to annotate, or paint, each of the malignant glands in prostate cancer with an image editor software - a time consuming and exhaustive process. Recently, two CAD algorithms have been described: probabilistic pairwise Markov models (PPMM) and spatially-invariant vector quantization (SIVQ). Briefly, SIVQ operates as a highly sensitive and specific pattern matching algorithm, making it optimal for the identification of any epithelial morphology, whereas PPMM operates as a highly sensitive detector of malignant perturbations in glandular lumenal architecture. Methods : By recapitulating algorithmically how a pathologist reviews prostate tissue sections, we created an algorithmic cascade of PPMM and SIVQ algorithms as previously described by Doyle el al. [1] where PPMM identifies the glands with abnormal lumenal architecture, and this area is then screened by SIVQ to identify the epithelium. Results :Abstract : Introduction : The advent of digital slides offers new opportunities within the practice of pathology such as the use of image analysis techniques to facilitate computer aided diagnosis (CAD) solutions. Use of CAD holds promise to enable new levels of decision support and allow for additional layers of quality assurance and consistency in rendered diagnoses. However, the development and testing of prostate cancer CAD solutions requires a ground truth map of the cancer to enable the generation of receiver operator characteristic (ROC) curves. This requires a pathologist to annotate, or paint, each of the malignant glands in prostate cancer with an image editor software - a time consuming and exhaustive process. Recently, two CAD algorithms have been described: probabilistic pairwise Markov models (PPMM) and spatially-invariant vector quantization (SIVQ). Briefly, SIVQ operates as a highly sensitive and specific pattern matching algorithm, making it optimal for the identification of any epithelial morphology, whereas PPMM operates as a highly sensitive detector of malignant perturbations in glandular lumenal architecture. Methods : By recapitulating algorithmically how a pathologist reviews prostate tissue sections, we created an algorithmic cascade of PPMM and SIVQ algorithms as previously described by Doyle el al. [1] where PPMM identifies the glands with abnormal lumenal architecture, and this area is then screened by SIVQ to identify the epithelium. Results : The performance of this algorithm cascade was assessed qualitatively (with the use of heatmaps) and quantitatively (with the use of ROC curves) and demonstrates greater performance in the identification of malignant prostatic epithelium. Conclusion : This ability to semi-autonomously paint nearly all the malignant epithelium of prostate cancer has immediate applications to future prostate cancer CAD development as a validated ground truth generator. In addition, such an approach has potential applications as a pre-screening/quality assurance tool. … (more)
- Is Part Of:
- Analytical cellular pathology. Volume 35:Number 4(2012)
- Journal:
- Analytical cellular pathology
- Issue:
- Volume 35:Number 4(2012)
- Issue Display:
- Volume 35, Issue 4 (2012)
- Year:
- 2012
- Volume:
- 35
- Issue:
- 4
- Issue Sort Value:
- 2012-0035-0004-0000
- Page Start:
- 251
- Page End:
- 265
- Publication Date:
- 2012
- Subjects:
- Pathology informatics -- whole slide imaging -- computer aided diagnosis -- SIVQ -- PPMM -- digital imaging -- prostate cancer -- cancer
Pathology, Cellular -- Periodicals
Cytology -- Periodicals
Oncology -- Periodicals
Cancer -- Cytopathology -- Periodicals
Cancer -- Cytopathology
Cytology
Oncology
Pathology, Cellular
Cell Transformation, Neoplastic
Cells -- pathology
Cytological Techniques
Genetic Techniques
Periodicals
571.936 - Journal URLs:
- https://www.hindawi.com/journals/acp/ ↗
http://iospress.metapress.com/content/121830/ ↗ - DOI:
- 10.3233/ACP-2012-0054 ↗
- Languages:
- English
- ISSNs:
- 2210-7177
- Deposit Type:
- Legaldeposit
- View Content:
- Available online (eLD content is only available in our Reading Rooms) ↗
- Physical Locations:
- British Library HMNTS - ELD Digital store
- Ingest File:
- 15858.xml