Accelerating copolymer inverse design using monte carlo tree search. Issue 46 (20th November 2020)
- Record Type:
- Journal Article
- Title:
- Accelerating copolymer inverse design using monte carlo tree search. Issue 46 (20th November 2020)
- Main Title:
- Accelerating copolymer inverse design using monte carlo tree search
- Authors:
- Patra, Tarak K.
Loeffler, Troy D.
Sankaranarayanan, Subramanian K. R. S. - Abstract:
- Abstract : There exists a broad class of sequencing problems in soft materials such as proteins and polymers that can be formulated as a heuristic search that involves decision making akin to a computer game. Abstract : There exists a broad class of sequencing problems in soft materials such as proteins and polymers that can be formulated as a heuristic search that involves decision making akin to a computer game. AI gaming algorithms such as Monte Carlo tree search (MCTS) gained prominence after their exemplary performance in the computer Go game and are decision trees aimed at identifying the path (moves) that should be taken by the policy to reach the final winning or optimal solution. Major challenges in inverse sequencing problems are that the materials search space is extremely vast and property evaluation for each sequence is computationally demanding. Reaching an optimal solution by minimizing the total number of evaluations in a given design cycle is therefore highly desirable. We demonstrate that one can adopt this approach for solving the sequencing problem by developing and growing a decision tree, where each node in the tree is a candidate sequence whose fitness is directly evaluated by molecular simulations. We interface MCTS with MD simulations and use a representative example of designing a copolymer compatibilizer, where the goal is to identify sequence specific copolymers that lead to zero interfacial energy between two immiscible homopolymers. We apply theAbstract : There exists a broad class of sequencing problems in soft materials such as proteins and polymers that can be formulated as a heuristic search that involves decision making akin to a computer game. Abstract : There exists a broad class of sequencing problems in soft materials such as proteins and polymers that can be formulated as a heuristic search that involves decision making akin to a computer game. AI gaming algorithms such as Monte Carlo tree search (MCTS) gained prominence after their exemplary performance in the computer Go game and are decision trees aimed at identifying the path (moves) that should be taken by the policy to reach the final winning or optimal solution. Major challenges in inverse sequencing problems are that the materials search space is extremely vast and property evaluation for each sequence is computationally demanding. Reaching an optimal solution by minimizing the total number of evaluations in a given design cycle is therefore highly desirable. We demonstrate that one can adopt this approach for solving the sequencing problem by developing and growing a decision tree, where each node in the tree is a candidate sequence whose fitness is directly evaluated by molecular simulations. We interface MCTS with MD simulations and use a representative example of designing a copolymer compatibilizer, where the goal is to identify sequence specific copolymers that lead to zero interfacial energy between two immiscible homopolymers. We apply the MCTS algorithm to polymer chain lengths varying from 10-mer to 30-mer, wherein the overall search space varies from 2 10 (1024) to 2 30 (∼1 billion). In each case, we identify a target sequence that leads to zero interfacial energy within a few hundred evaluations demonstrating the scalability and efficiency of MCTS in exploring practical materials design problems with exceedingly vast chemical/material search space. Our MCTS-MD framework can be easily extended to several other polymer and protein inverse design problems, in particular, for cases where sequence-property data is either unavailable and/or is resource intensive. … (more)
- Is Part Of:
- Nanoscale. Volume 12:Issue 46(2020)
- Journal:
- Nanoscale
- Issue:
- Volume 12:Issue 46(2020)
- Issue Display:
- Volume 12, Issue 46 (2020)
- Year:
- 2020
- Volume:
- 12
- Issue:
- 46
- Issue Sort Value:
- 2020-0012-0046-0000
- Page Start:
- 23653
- Page End:
- 23662
- Publication Date:
- 2020-11-20
- Subjects:
- Nanoscience -- Periodicals
Nanotechnology -- Periodicals
620.505 - Journal URLs:
- http://www.rsc.org/Publishing/Journals/NR/Index.asp ↗
http://www.rsc.org/ ↗ - DOI:
- 10.1039/d0nr06091g ↗
- Languages:
- English
- ISSNs:
- 2040-3364
- Deposit Type:
- Legaldeposit
- View Content:
- Available online (eLD content is only available in our Reading Rooms) ↗
- Physical Locations:
- British Library DSC - 9830.266000
British Library DSC - BLDSS-3PM
British Library STI - ELD Digital store - Ingest File:
- 14932.xml