Chemical modelling of complex organic molecules with peptide-like bonds in star-forming regions. Issue 2 (21st November 2017)

• Record Type: Journal Article
• Authors: Quénard, David; Jiménez-Serra, Izaskun; Viti, Serena; Holdship, Jonathan; Coutens, Audrey
• Is Part Of: Monthly notices of the Royal Astronomical Society. Volume 474:Issue 2(2018)
• Page Start: 2796
• Page End: 2812
• Publication Date: 2017-11-21
• Subjects: astrochemistry -- molecular data -- methods: numerical -- ISM: abundances; Astronomy -- Periodicals; Periodicals; 520.5
• DOI: 10.1093/mnras/stx2960
• Languages: English
• ISSNs: 0035-8711

Abstract

Abstract: Peptide bonds (N–C = O) play a key role in metabolic processes since they link amino acids into peptide chains or proteins. Recently, several molecules containing peptide-like bonds have been detected across multiple environments in the interstellar medium, growing the need to fully understand their chemistry and their role in forming larger pre-biotic molecules. We present a comprehensive study of the chemistry of three molecules containing peptide-like bonds: HNCO, NH2 CHO, and CH3 NCO. We also included other CHNO isomers (HCNO, HOCN) and C2 H3 NO isomers (CH3 OCN, CH3 CNO) to the study. We have used the uclchem gas–grain chemical code and included in our chemical network all possible formation/destruction pathways of these peptide-like molecules recently investigated either by theoretical calculations or in laboratory experiments. Our predictions are compared to observations obtained towards the proto-star IRAS 16293−2422 and the L1544 pre-stellar core. Our results show that some key reactions involving the CHNO and C2 H3 NO isomers need to be modified to match the observations. Consistently with recent laboratory findings, hydrogenation is unlikely to produce NH2 CHO on grain surfaces, while a combination of radical–radical surface reactions and gas-phase reactions is a better alternative. In addition, better results are obtained for NH2 CHO when a slightly higher activation energy of 25 K is considered for the gas-phase reaction NH2 + H2 CO → NH2 CHO + H. Finally, our modelling shows that the observed correlation between NH2 CHO and HNCO in star-forming regions may come from the fact that HNCO and NH2 CHO react to temperature in the same manner rather than from a direct chemical link between the two species.