Identification of tumor-infiltrating immune cells and prognostic validation of tumor-infiltrating mast cells in adrenocortical carcinoma: results from bioinformatics and real-world data. (1st January 2020)
- Record Type:
- Journal Article
- Title:
- Identification of tumor-infiltrating immune cells and prognostic validation of tumor-infiltrating mast cells in adrenocortical carcinoma: results from bioinformatics and real-world data. (1st January 2020)
- Main Title:
- Identification of tumor-infiltrating immune cells and prognostic validation of tumor-infiltrating mast cells in adrenocortical carcinoma: results from bioinformatics and real-world data
- Authors:
- Tian, Xi
Xu, Wenhao
Wang, Yuchen
Anwaier, Aihetaimujiang
Wang, Hongkai
Wan, Fangning
Zhu, Yu
Cao, Dalong
Shi, Guohai
Zhu, Yiping
Qu, Yuanyuan
Zhang, Hailiang
Ye, Dingwei - Abstract:
- ABSTRACT: Objective: The purpose of this study was to explore the composition of tumor-infiltrating immune cells (TIIC) and prognostic significance of tumor-infiltrating mast cells (TIMC) in adrenocortical carcinoma (ACC). Methods: The gene expression profiles of ACC were downloaded from the Cancer Genome Atlas (TCGA) and Gene Expression Omnibus (GSE90713, GSE12368). The abundance of TIICs in ACC samples was calculated by CIBERSORT algorithm and immunohistochemistry was used to identify mast cells of 39 tumor samples from Fudan University Shanghai Cancer Center (FUSCC). Differentially expressed genes (DEGs) were analyzed by LIMMA package using R software. Survival analysis was analyzed by Kaplan-Meier method and Cox regression models. Results: The abundance of mast cells ( p = .008) was positively correlated with ACC patients' outcome in TCGA cohort and was also positively correlated with both overall survival ( p < .05) and progression-free survival ( p < .05) in FUSCC cohort. Different TIMC infiltrations showed significant changes in signaling pathways including DNA replication, nuclear chromosome segregation, and meiotic cell cycle process of ACC. In addition, elevated expression of eight hub genes (KIF18A, CDCA8, SKA1, CEP55, BUB1, CDK1, SGOL1, SGOL2) related to the abundance of TIMC in ACC was significantly correlated with the poor prognosis of the patients. Conclusion: In conclusion, higher TIMC infiltration was positively correlated with ACC patients' outcome in bothABSTRACT: Objective: The purpose of this study was to explore the composition of tumor-infiltrating immune cells (TIIC) and prognostic significance of tumor-infiltrating mast cells (TIMC) in adrenocortical carcinoma (ACC). Methods: The gene expression profiles of ACC were downloaded from the Cancer Genome Atlas (TCGA) and Gene Expression Omnibus (GSE90713, GSE12368). The abundance of TIICs in ACC samples was calculated by CIBERSORT algorithm and immunohistochemistry was used to identify mast cells of 39 tumor samples from Fudan University Shanghai Cancer Center (FUSCC). Differentially expressed genes (DEGs) were analyzed by LIMMA package using R software. Survival analysis was analyzed by Kaplan-Meier method and Cox regression models. Results: The abundance of mast cells ( p = .008) was positively correlated with ACC patients' outcome in TCGA cohort and was also positively correlated with both overall survival ( p < .05) and progression-free survival ( p < .05) in FUSCC cohort. Different TIMC infiltrations showed significant changes in signaling pathways including DNA replication, nuclear chromosome segregation, and meiotic cell cycle process of ACC. In addition, elevated expression of eight hub genes (KIF18A, CDCA8, SKA1, CEP55, BUB1, CDK1, SGOL1, SGOL2) related to the abundance of TIMC in ACC was significantly correlated with the poor prognosis of the patients. Conclusion: In conclusion, higher TIMC infiltration was positively correlated with ACC patients' outcome in both TCGA and FUSCC cohort. Lower TIMC infiltration and elevated expression of hub genes ( KIF18A, CDCA8, SKA1, CEP55, BUB1, CDK1, SGOL1, SGOL2 ) are markedly correlated with aggressive progression and poor prognosis, which might shed lights on novel targets for treatment strategies. … (more)
- Is Part Of:
- Oncoimmunology. Volume 9:Number 1(2020)
- Journal:
- Oncoimmunology
- Issue:
- Volume 9:Number 1(2020)
- Issue Display:
- Volume 9, Issue 1 (2020)
- Year:
- 2020
- Volume:
- 9
- Issue:
- 1
- Issue Sort Value:
- 2020-0009-0001-0000
- Page Start:
- Page End:
- Publication Date:
- 2020-01-01
- Subjects:
- Adrenocortical carcinoma -- tumor infiltrating immune cells -- tumor infiltrating mast cells -- CIBERSORT -- differentially expressed genes
Tumors -- Immunological aspects -- Periodicals
Neoplasms -- therapy -- Periodicals
Immunotherapy -- Periodicals
616.994 - Journal URLs:
- http://www.landesbioscience.com/journals/oncoimmunology/ ↗
http://www.tandfonline.com/toc/koni20/current ↗
http://www.tandf.co.uk/journals/ ↗ - DOI:
- 10.1080/2162402X.2020.1784529 ↗
- Languages:
- English
- ISSNs:
- 2162-402X
- Deposit Type:
- Legaldeposit
- View Content:
- Available online (eLD content is only available in our Reading Rooms) ↗
- Physical Locations:
- British Library DSC - BLDSS-3PM
British Library HMNTS - ELD Digital store - Ingest File:
- 13680.xml