Characterization of the complete plastid genome of Acer tsinglingense, an endemic tree species in China. Issue 2 (3rd July 2019)

• Record Type: Journal Article
• Authors: Dong, Peng-Bin; Liu, Yu; Gao, Qi-Yuan; Yang, Ting; Chen, Xue-Yi; Yang, Jia-Yu; Shang, Qian-Han; Fang, Min-Feng
• Is Part Of: Mitochondrial DNA. Volume 4:Issue 2(2019)
• Page Start: 4065
• Page End: 4066
• Publication Date: 2019-07-03
• Subjects: Acer tsinglingense -- chloroplast genome -- phylogenetic relationship; Mitochondrial DNA -- Periodicals; 572.869
• DOI: 10.1080/23802359.2019.1689863
• Languages: English
• ISSNs: 2380-2359

Abstract

Abstract: Acer tsinglingense is an ecologically and economically important tree species in China. In this study, we characterized its whole plastid genome sequence using the Illumina sequencing platform. The complete plastid genome size of A. tsinglingense is 156, 039 bp in length, including a large single-copy [LSC] region of 85, 760 bp, a small single-copy [SSC] region of 18, 139 bp, and a pair of inverted repeats [IRs] of 26, 070 bp. The genome contains 137 genes, including 89 protein-coding genes, 40 tRNA genes, and 8 rRNA genes. The GC contents in chloroplast genome, LSC region, SSC region, and IR region were 38.0%, 36.2%, 32.4%, and 42.9%, respectively. The phylogenetic analysis based on the plastid genomes showed that A. tsinglingense was more closely related with the congeneric A. laevigatum, A. palmatum, A. wilsonii, and A. buergerianum, these species were clustered into a monophyletic clade with high bootstrap support.