The complete chloroplast genome of a gynodioecious deciduous orchid Satyrium ciliatum (Orchidaceae) female. Issue 2 (3rd July 2019)

• Record Type: Journal Article
• Authors: Ma, Xiaokai; Lin, Han; Chen, Yanqiong; Lan, Siren; Ming, Ray
• Is Part Of: Mitochondrial DNA. Volume 4:Issue 2(2019)
• Page Start: 3876
• Page End: 3877
• Publication Date: 2019-07-03
• Subjects: Satyrium ciliatum -- gynodioecy -- plastid genome -- phylogeny -- orchid; Mitochondrial DNA -- Periodicals; 572.869
• DOI: 10.1080/23802359.2019.1687359
• Languages: English
• ISSNs: 2380-2359

Abstract

Abstract: The chloroplast (cp) genome sequence of a gynodioecious Satyrium ciliatum female type has been characterized using Illumina pair-end sequencing. The complete cp genome was 154, 418 bp in length, containing a large single copy region (LSC) of 83, 475 bp and a small single copy region (SSC) of 17, 513 bp, which were separated by a pair of 26, 715 bp inverted repeat regions (IRs). The genome contained 132 genes, with 113 unique genes, including 79 protein-coding genes, 30 tRNA genes, and 4 rRNA genes. The overall GC content is 37.18% with the values of the LSC, SSC, and IR regions are 34.90%, 30.15%, and 43.06%, respectively. Phylogenetic analysis suggested that the S. ciliatum is close to Platanthera japonica (MG925368) in subfamily Orchidoideae.