Multiplex screening of 275 plasma protein biomarkers to identify a signature for early detection of colorectal cancer. Issue 1 (13th November 2019)
- Record Type:
- Journal Article
- Title:
- Multiplex screening of 275 plasma protein biomarkers to identify a signature for early detection of colorectal cancer. Issue 1 (13th November 2019)
- Main Title:
- Multiplex screening of 275 plasma protein biomarkers to identify a signature for early detection of colorectal cancer
- Authors:
- Bhardwaj, Megha
Weigl, Korbinian
Tikk, Kaja
Benner, Axel
Schrotz‐King, Petra
Brenner, Hermann - Abstract:
- Abstract : Blood‐based protein biomarkers may be an attractive option for early detection of colorectal cancer (CRC). Here, we used a two‐stage design to measure 275 protein markers by proximity extension assay (PEA), first in plasma samples of a discovery set consisting of 98 newly diagnosed CRC cases and 100 age‐ and gender‐matched controls free of neoplasm at screening colonoscopy. An algorithm predicting the presence of early‐ or late‐stage CRC was derived by least absolute shrinkage and selection operator regression with .632+ bootstrap method, and the algorithms were then validated using PEA again in an independent validation set consisting of participants of screening colonoscopy with and without CRC ( n = 56 and 102, respectively). Three different signatures for all‐, early‐, and late‐stage CRC consisting of 9, 12, and 11 protein markers were obtained in the discovery set with areas under the curves (AUCs) after .632 + bootstrap adjustment of 0.92, 0.91, and 0.96, respectively. External validation among participants of screening colonoscopy yielded AUCs of 0.76 [95% confidence interval (95% CI), 0.67–0.84], 0.75 (95% CI, 0.62–0.87), and 0.80 (95% CI, 0.68–0.89) for all‐, early‐, and late‐stage CRC, respectively. Although the identified protein markers are not competitive with the best available stool tests, these proteins may contribute to the development of powerful blood‐based tests for CRC early detection in the future. Abstract : A signature consisting of 12Abstract : Blood‐based protein biomarkers may be an attractive option for early detection of colorectal cancer (CRC). Here, we used a two‐stage design to measure 275 protein markers by proximity extension assay (PEA), first in plasma samples of a discovery set consisting of 98 newly diagnosed CRC cases and 100 age‐ and gender‐matched controls free of neoplasm at screening colonoscopy. An algorithm predicting the presence of early‐ or late‐stage CRC was derived by least absolute shrinkage and selection operator regression with .632+ bootstrap method, and the algorithms were then validated using PEA again in an independent validation set consisting of participants of screening colonoscopy with and without CRC ( n = 56 and 102, respectively). Three different signatures for all‐, early‐, and late‐stage CRC consisting of 9, 12, and 11 protein markers were obtained in the discovery set with areas under the curves (AUCs) after .632 + bootstrap adjustment of 0.92, 0.91, and 0.96, respectively. External validation among participants of screening colonoscopy yielded AUCs of 0.76 [95% confidence interval (95% CI), 0.67–0.84], 0.75 (95% CI, 0.62–0.87), and 0.80 (95% CI, 0.68–0.89) for all‐, early‐, and late‐stage CRC, respectively. Although the identified protein markers are not competitive with the best available stool tests, these proteins may contribute to the development of powerful blood‐based tests for CRC early detection in the future. Abstract : A signature consisting of 12 plasma protein biomarkers derived in a clinical setting and independently validated in a true screening setting (participants of screening colonoscopy) yielded area under the curves of 0.91 and 0.75 for distinguishing early‐stage colorectal cases from controls free of neoplasms. These 12 protein markers may contribute to the development of blood‐based tests for population‐based screening. … (more)
- Is Part Of:
- Molecular oncology. Volume 14:Issue 1(2020)
- Journal:
- Molecular oncology
- Issue:
- Volume 14:Issue 1(2020)
- Issue Display:
- Volume 14, Issue 1 (2020)
- Year:
- 2020
- Volume:
- 14
- Issue:
- 1
- Issue Sort Value:
- 2020-0014-0001-0000
- Page Start:
- 8
- Page End:
- 21
- Publication Date:
- 2019-11-13
- Subjects:
- colorectal cancer -- diagnostic biomarkers -- early detection -- proximity extension assay -- screening -- sensitivity and specificity
Cancer -- Molecular aspects -- Periodicals
616.994005 - Journal URLs:
- http://www.journals.elsevier.com/molecular-oncology/ ↗
http://febs.onlinelibrary.wiley.com/hub/journal/10.1002/(ISSN)1878-0261/issues/ ↗
http://www.elsevier.com/journals ↗ - DOI:
- 10.1002/1878-0261.12591 ↗
- Languages:
- English
- ISSNs:
- 1574-7891
- Deposit Type:
- Legaldeposit
- View Content:
- Available online (eLD content is only available in our Reading Rooms) ↗
- Physical Locations:
- British Library DSC - 5900.817993
British Library DSC - BLDSS-3PM
British Library HMNTS - ELD Digital store - Ingest File:
- 12601.xml