The complete chloroplast genome of Caltha Palustris (Ranunculaceae). Issue 2 (3rd July 2018)

• Record Type: Journal Article
• Authors: Lee, Junki; Kim, Yoojin; Chun, Hyang Sook; Kwon, Kisung; Koh, Youngho; Kang, Tae Sun; Kang, Jung-Hwa; Kim, Eun-Jeong; Nah, Gyoungju
• Is Part Of: Mitochondrial DNA. Volume 3:Issue 2(2018)
• Page Start: 1090
• Page End: 1091
• Publication Date: 2018-07-03
• Subjects: Caltha palustris -- Ranunculaceae -- complete chloroplast genome -- next generation sequencing; Mitochondrial DNA -- Periodicals; 572.869
• DOI: 10.1080/23802359.2018.1508383
• Languages: English
• ISSNs: 2380-2359

Abstract

Abstract: The complete chloroplast genome sequence of Caltha palustris, a species of the Ranunculaceae family, was characterized from the de novo assembly of HiSeq (Illumina Co.) paired-end sequencing data. The chloroplast genome of C. palustris was 155, 292 bp in length, with a large single-copy (LSC) region of 84, 120 bp, a small single-copy (SSC) region of 18, 342 bp, and a pair of identical inverted repeat regions (IRs) of 26, 415 bp. The genome contained a total of 114 genes, including 80 protein-coding genes, 30 transfer RNA (tRNA) genes, and 4 ribosomal RNA (rRNA) genes. The phylogenetic analysis of C. palustris with 14 related species revealed the closest taxonomical relationship with Hydrastis canadensis in the Ranunculaceae family.