Genomicus 2018: karyotype evolutionary trees and on-the-fly synteny computing. Issue Volume 46:Issue D1(2018) (26th October 2017)

• Record Type: Journal Article
• Authors: Nguyen, Nga Thi Thuy; Vincens, Pierre; Roest Crollius, Hugues; Louis, Alexandra
• Is Part Of: Nucleic acids research. Volume 46:Issue D1(2018)
• Page Start: D816
• Page End: D822
• Publication Date: 2017-10-26
• Subjects: Nucleic acids -- Periodicals; Molecular biology -- Periodicals; 572.805
• DOI: 10.1093/nar/gkx1003
• Languages: English
• ISSNs: 0305-1048

Abstract

Abstract: Since 2010, the Genomicus web server is available online at http://genomicus.biologie.ens.fr/genomicus . This graphical browser provides access to comparative genomic analyses in four different phyla (Vertebrate, Plants, Fungi, and non vertebrate Metazoans). Users can analyse genomic information from extant species, as well as ancestral gene content and gene order for vertebrates and flowering plants, in an integrated evolutionary context. New analyses and visualization tools have recently been implemented in Genomicus Vertebrate. Karyotype structures from several genomes can now be compared along an evolutionary pathway (Multi-KaryotypeView), and synteny blocks can be computed and visualized between any two genomes (PhylDiagView).