TBIO-27. GABRIELLA MILLER KIDS FIRST DATA RESOURCE CENTER ADVANCING GENETIC RESEARCH IN CHILDHOOD CANCER AND STRUCTURAL BIRTH DEFECTS THROUGH LARGE SCALE INTEGRATED DATA-DRIVEN DISCOVERY AND CLOUD-BASED PLATFORMS FOR COLLABORATIVE ANALYSIS. Issue 2 (22nd June 2018)

• Record Type: Journal Article
• Authors: Heath, Allison P; Raman, Pichai; Zhu, Yuankun; Lilly, Jena V; Taylor, Deanne; Storm, Phillip B; Waanders, Angela J; Volchenboum, Sam; Stein, Lincoln; Ellrott, Kyle; Margolin, Adam; Davis-Dusenbery, Brandi; Grossman, Robert; Ferretti, Vincent; Mueller, Sabine; Nazarian, Javad; Resnick, Adam C
• Is Part Of: Neuro-oncology. Volume 20:Issue 2(2018)supplement 2
• Page Start: i186
• Page End: i186
• Publication Date: 2018-06-22
• Subjects: Brain Neoplasms -- Periodicals; Brain -- Tumors -- Periodicals; Brain -- Cancer -- Periodicals; Nervous system -- Cancer -- Periodicals; 616.99481
• DOI: 10.1093/neuonc/noy059.715
• Languages: English
• ISSNs: 1522-8517

Abstract

Abstract: Childhood cancers and structural birth share a common context of context in developmental biology that remains poorly defined. Indeed, epidemiologically, pediatric central nervous system tumors are some of the most frequently co-occurring cancers in children with birth defects. While researchers have been increasingly identifying the underlying biological causes of these conditions, the role of genetics and/or shared pathways across cancer and birth defects is not yet fully understood. A better understanding of a common developmental setting could spur advancements in prevention, early detection, and therapeutic interventions that will improve the lives of the children and families impacted by these conditions. The Common Fund's Gabriella Miller Kids First Pediatric Research Program represents a national initiative focused on developing a large-scale genomic data supported by a data resource center (DRC) that will empower collaborative discovery and shared resources for research. The DRC will allow researchers everywhere access to vast amounts of childhood cancer and structural birth defects through cloud-based computational and analytics portals including CAVATICA (cavatica.org). Approximately 8, 000 patient samples will be ready for analysis at the launch this year including a data cohort of more than 2000 pediatric brain tumor WGS/RNAseq provided by the Children's Brain Tumor Tissue Consortium (CBTTC) and the Pacific Pediatric Neuro-Oncology Consortium (PNOC). More than 25, 000 WGS are expected to be processed by 2019, making the Kids First Data Resource Center the largest pediatric data cohort of its kind.