A novel fluorescence method for the highly sensitive detection of T4 polynucleotide kinase based on polydopamine nanotubes. (17th October 2019)

• Record Type: Journal Article
• Authors: Shen, Xue-Ping; Ge, Jia; Chen, Juan; Shen, Yan-Mei; Meng, Hong-Min; Li, Zhao-Hui; Qu, Ling-Bo
• Is Part Of: New journal of chemistry. Volume 43:Number 42(2019)
• Page Start: 16753
• Page End: 16758
• Publication Date: 2019-10-17
• Subjects: Chemistry -- Periodicals; Chimie -- Périodiques; 540
• DOI: 10.1039/c9nj04381k
• Languages: English
• ISSNs: 1144-0546

Abstract

Abstract : A novel fluorescence method has been developed for the detection of T4 PNK using FRET between dye-labeled ssDNA and PDANTs. Abstract : Herein, a novel fluorescence method is reported for the detection of T4 polynucleotide kinase (T4 PNK) based on a FRET between dye-labeled DNA and polydopamine nanotubes (PDANTs). PDANTs can bind and quench the fluorescent dye-labeled single-stranded DNA (ssDNA) probes, whereas they have low affinity towards double-stranded DNA (dsDNA). In the presence of T4 PNK and ATP, λ exonuclease initiated the hydrolysis of the 5-phosphoryl termini of dsDNA and released ssDNA, which could strongly adsorb on the PDANTs and decrease the fluorescence intensity; on the basis of this concept, we successfully established a method for the detection of T4 PNK. The method displayed the detection limit of 0.01 U mL −1 with a linear range from 0.01 to 50 U mL −1 . In addition, we investigated the effect of several inhibitors including Na2 HPO4, (NH4 )2 SO4 and NaCl. The method provides a platform for the detection of T4 PNK and evaluation of inhibitors.