Sebacinoids within rhizospheric fungal communities associated with subsistence farming in the Congo Basin: a needle in each haystack. Issue 8 (27th June 2019)

• Record Type: Journal Article
• Authors: Venneman, Jolien; De Tender, Caroline; Debode, Jane; Audenaert, Kris; Baert, Geert; Vermeir, Pieter; Cremelie, Pieter; Bekaert, Boris; Landschoot, Sofie; Thienpondt, Bert; Djailo, Benoît Dhed'a; Vereecke, Danny; Haesaert, Geert
• Is Part Of: FEMS microbiology ecology. Volume 95:Issue 8(2019)
• Publication Date: 2019-06-27
• Subjects: fungal diversity -- metabarcoding -- plant growth-promoting tropical endophytes -- rhizosphere -- Sebacinales -- subsistence agriculture; Microbial ecology -- Periodicals; Microbiology -- Periodicals; 579.17
• DOI: 10.1093/femsec/fiz101
• Languages: English
• ISSNs: 0168-6496

Abstract

ABSTRACT: The unique ecosystem of the Congolese rainforest has only scarcely been explored for its plant–fungal interactions. Here, we characterized the root fungal communities of field-grown maize and of Panicum from adjacent borders in the Congo Basin and assessed parameters that could shape them. The soil properties indicated that comparable poor soil conditions prevailed in fields and borders, illustrating the low input character of local subsistence farming. The rhizosphere fungal communities, dominated by ascomycetous members, were structured by plant species, slash-and-burn practices and soil P, pH and C/N ratio. Examining fungi with potential plant growth-promoting abilities, the glomeromycotan communities appeared to be affected by the same parameters, whereas the inconspicuous symbionts of the order Sebacinales seemed less susceptible to environmental and anthropogenic factors. Notwithstanding the low abundances at which they were detected, sebacinoids occurred in 87% of the field samples, implying that they represent a consistent taxon within indigenous fungal populations across smallholder farm sites. Pending further insight into their ecosystem functionality, these data suggest that Sebacinales are robust root inhabitants that might be relevant for on-farm inoculum development within sustainable soil fertility management in the Sub-Saharan region. Abstract : This study shows that rhizospheric Sebacinales are ubiquitous across Congolese smallholder maize fields, and demonstrates that these fungi are less susceptible to subsistence agricultural practices than the total fungal community.