A merged molecular docking, ADME-T and dynamics approaches towards the genus of Arisaema as herpes simplex virus type 1 and type 2 inhibitors. (February 2019)

• Record Type: Journal Article
• Authors: Kant, Kamal; Lal, Uma Ranjan; Kumar, Anoop; Ghosh, Manik
• Is Part Of: Computational biology and chemistry. Volume 78(2019)
• Page Start: 217
• Page End: 226
• Publication Date: 2019-02
• Subjects: Herpes viruses -- Phytoconstituents -- Molecular docking -- ADME-T -- Molecular dynamics; Chemistry -- Data processing -- Periodicals; Biology -- Data processing -- Periodicals; Biochemistry -- Data processing; Biology -- Data processing; Molecular biology -- Data processing; Periodicals; Electronic journals; 542.85
• DOI: 10.1016/j.compbiolchem.2018.12.005
• Languages: English
• ISSNs: 1476-9271

Abstract

Graphical abstract: Highlights: The antiviral potential of Arisaema was investigated. The most promising hits are 39, 21, 19, 20, 51. Further studies are required. Abstract: An attempt toward screening of phytoconstituents ( Arisaema genus) against herpes viruses (HSV-1 and HSV-2) was carried out using in silico approaches. Human HSV-1 and HSV-2 are accountable for cold sores genital herpes, respectively. Two drug targets, namely thymidine kinase (TK; PDB:2ki5 ) serine protease (PDB:1at3 ) were selected for HSV-1 and HSV-2. Initially, molecular docking tool was employed to screened apex hits phytoconstituents against herpes infections. ADME-T studies of top ranked were also further highlighted to achieve their effectiveness. Following, molecular dynamics studies were also examined to further optimize the stability of ligands. Glide scores and binding interactions of phytoconstituents were compared with Acyclovir, the main drug used in treatment of HSV, the screened top hits exhibited more glide scores and better binding for both HSV-1 and HSV-2 receptors. Additionally, ADME-T showed an ideal range for top hits while molecular dynamics results also illustrated stability of models. Ultimately, the whole efforts reveal to top three most promising hits for HSV-1(39, 21, 19) and HSV-2(20, 51, 19) receptors which can be explored further in wet lab experiments as promising agents against HSV infections.