A vectorized Levenberg-Marquardt model fitting algorithm for efficient post-processing of cardiac T1 mapping MRI. (1st May 2018)
- Record Type:
- Journal Article
- Title:
- A vectorized Levenberg-Marquardt model fitting algorithm for efficient post-processing of cardiac T1 mapping MRI. (1st May 2018)
- Main Title:
- A vectorized Levenberg-Marquardt model fitting algorithm for efficient post-processing of cardiac T1 mapping MRI
- Authors:
- Liu, Shufang
Bustin, Aurelien
Ferry, Pauline
Codreanu, Andrei
Burschka, Darius
Menini, Anne
Odille, Freddy - Abstract:
- Abstract: Purpose: T1 mapping is an emerging MRI research tool to assess diseased myocardial tissue. Recent research has been focusing on the image acquisition protocol and motion correction, yet little attention has been paid to the curve fitting algorithm. Methods: After nonrigid registration of the image series, a vectorized Levenberg-Marquardt (LM) technique is proposed to improve the robustness of the curve fitting algorithm by allowing spatial regularization of the parametric maps. In addition, a region-based initialization is proposed to improve the initial guess of the T1 value. The algorithm was validated with cardiac T1 mapping data from 16 volunteers acquired with saturation-recovery (SR) and inversion-recovery (IR) techniques at 3T, both pre- and post-injection of a contrast agent. Signal models of T1 relaxation with 2 and 3 parameters were tested. Results: The vectorized LM fitting showed good agreement with its pixel-wise version but allowed reduced calculation time (60 s against 696 s on average in Matlab with 256 × 256 × 8(11) images). Increasing the spatial regularization parameter led to noise reduction and improved precision of T1 values in SR sequences. The region-based initialization was particularly useful in IR data to reduce the variability of the blood T1 . Conclusions: We have proposed a vectorized curve fitting algorithm allowing spatial regularization, which could improve the robustness of the curve fitting, especially for myocardial T1 mappingAbstract: Purpose: T1 mapping is an emerging MRI research tool to assess diseased myocardial tissue. Recent research has been focusing on the image acquisition protocol and motion correction, yet little attention has been paid to the curve fitting algorithm. Methods: After nonrigid registration of the image series, a vectorized Levenberg-Marquardt (LM) technique is proposed to improve the robustness of the curve fitting algorithm by allowing spatial regularization of the parametric maps. In addition, a region-based initialization is proposed to improve the initial guess of the T1 value. The algorithm was validated with cardiac T1 mapping data from 16 volunteers acquired with saturation-recovery (SR) and inversion-recovery (IR) techniques at 3T, both pre- and post-injection of a contrast agent. Signal models of T1 relaxation with 2 and 3 parameters were tested. Results: The vectorized LM fitting showed good agreement with its pixel-wise version but allowed reduced calculation time (60 s against 696 s on average in Matlab with 256 × 256 × 8(11) images). Increasing the spatial regularization parameter led to noise reduction and improved precision of T1 values in SR sequences. The region-based initialization was particularly useful in IR data to reduce the variability of the blood T1 . Conclusions: We have proposed a vectorized curve fitting algorithm allowing spatial regularization, which could improve the robustness of the curve fitting, especially for myocardial T1 mapping with SR sequences. … (more)
- Is Part Of:
- Computers in biology and medicine. Volume 96(2018)
- Journal:
- Computers in biology and medicine
- Issue:
- Volume 96(2018)
- Issue Display:
- Volume 96, Issue 2018 (2018)
- Year:
- 2018
- Volume:
- 96
- Issue:
- 2018
- Issue Sort Value:
- 2018-0096-2018-0000
- Page Start:
- 106
- Page End:
- 115
- Publication Date:
- 2018-05-01
- Subjects:
- T1 mapping -- Curve fitting -- Cardiac MR -- Relaxometry -- MR parameter mapping
Medicine -- Data processing -- Periodicals
Biology -- Data processing -- Periodicals
610.285 - Journal URLs:
- http://www.sciencedirect.com/science/journal/00104825/ ↗
http://www.elsevier.com/journals ↗ - DOI:
- 10.1016/j.compbiomed.2018.03.009 ↗
- Languages:
- English
- ISSNs:
- 0010-4825
- Deposit Type:
- Legaldeposit
- View Content:
- Available online (eLD content is only available in our Reading Rooms) ↗
- Physical Locations:
- British Library DSC - 3394.880000
British Library DSC - BLDSS-3PM
British Library HMNTS - ELD Digital store - Ingest File:
- 11309.xml