A Transfer Learning Approach for Malignant Prostate Lesion Detection on Multiparametric MRI. (19th July 2019)
- Record Type:
- Journal Article
- Title:
- A Transfer Learning Approach for Malignant Prostate Lesion Detection on Multiparametric MRI. (19th July 2019)
- Main Title:
- A Transfer Learning Approach for Malignant Prostate Lesion Detection on Multiparametric MRI
- Authors:
- Chen, Quan
Hu, Shiliang
Long, Peiran
Lu, Fang
Shi, Yujie
Li, Yunpeng - Abstract:
- Purpose: In prostate focal therapy, it is important to accurately localize malignant lesions in order to increase biological effect of the tumor region while achieving a reduction in dose to noncancerous tissue. In this work, we proposed a transfer learning–based deep learning approach, for classification of prostate lesions in multiparametric magnetic resonance imaging images. Methods: Magnetic resonance imaging images were preprocessed to remove bias artifact and normalize the data. Two state-of-the-art deep convolutional neural network models, InceptionV3 and VGG-16, were pretrained on ImageNet data set and retuned on the multiparametric magnetic resonance imaging data set. As lesion appearances differ by the prostate zone that it resides in, separate models were trained. Ensembling was performed on each prostate zone to improve area under the curve. In addition, the predictions from lesions on each prostate zone were scaled separately to increase the area under the curve for all lesions combined. Results: The models were tuned to produce the highest area under the curve on validation data set. When it was applied to the unseen test data set, the transferred InceptionV3 model achieved an area under the curve of 0.81 and the transferred VGG-16 model achieved an area under the curve of 0.83. This was the third best score among the 72 methods from 33 participating groups in ProstateX competition. Conclusion: The transfer learning approach is a promising method for prostatePurpose: In prostate focal therapy, it is important to accurately localize malignant lesions in order to increase biological effect of the tumor region while achieving a reduction in dose to noncancerous tissue. In this work, we proposed a transfer learning–based deep learning approach, for classification of prostate lesions in multiparametric magnetic resonance imaging images. Methods: Magnetic resonance imaging images were preprocessed to remove bias artifact and normalize the data. Two state-of-the-art deep convolutional neural network models, InceptionV3 and VGG-16, were pretrained on ImageNet data set and retuned on the multiparametric magnetic resonance imaging data set. As lesion appearances differ by the prostate zone that it resides in, separate models were trained. Ensembling was performed on each prostate zone to improve area under the curve. In addition, the predictions from lesions on each prostate zone were scaled separately to increase the area under the curve for all lesions combined. Results: The models were tuned to produce the highest area under the curve on validation data set. When it was applied to the unseen test data set, the transferred InceptionV3 model achieved an area under the curve of 0.81 and the transferred VGG-16 model achieved an area under the curve of 0.83. This was the third best score among the 72 methods from 33 participating groups in ProstateX competition. Conclusion: The transfer learning approach is a promising method for prostate cancer detection on multiparametric magnetic resonance imaging images. Features learned from ImageNet data set can be useful for medical images. … (more)
- Is Part Of:
- Technology in cancer research & treatment. Volume 18(2019)
- Journal:
- Technology in cancer research & treatment
- Issue:
- Volume 18(2019)
- Issue Display:
- Volume 18, Issue 2019 (2019)
- Year:
- 2019
- Volume:
- 18
- Issue:
- 2019
- Issue Sort Value:
- 2019-0018-2019-0000
- Page Start:
- Page End:
- Publication Date:
- 2019-07-19
- Subjects:
- mpMRI -- prostate lesion -- transfer learning -- AI -- convolutional neural network -- focal therapy
Oncology -- Periodicals
Cancer -- Diagnosis -- Periodicals
Cancer -- Treatment -- Technological innovations -- Periodicals
616.994 - Journal URLs:
- http://tct.sagepub.com/ ↗
http://www.tcrt.org ↗
http://www.sagepub.com ↗ - DOI:
- 10.1177/1533033819858363 ↗
- Languages:
- English
- ISSNs:
- 1533-0346
- Deposit Type:
- Legaldeposit
- View Content:
- Available online (eLD content is only available in our Reading Rooms) ↗
- Physical Locations:
- British Library DSC - BLDSS-3PM
British Library HMNTS - ELD Digital store - Ingest File:
- 10922.xml