Evaluating drug-drug interaction information in NDF-RT and DrugBank. Issue 1 (December 2015)
- Record Type:
- Journal Article
- Title:
- Evaluating drug-drug interaction information in NDF-RT and DrugBank. Issue 1 (December 2015)
- Main Title:
- Evaluating drug-drug interaction information in NDF-RT and DrugBank
- Authors:
- Peters, Lee
Bahr, Nathan
Bodenreider, Olivier - Abstract:
- Abstract Background There is limited consensus among drug information sources on what constitutes drug-drug interactions (DDIs). We investigate DDI information in two publicly available sources, NDF-RT and DrugBank. Methods We acquire drug-drug interactions from NDF-RT and DrugBank, and normalize the drugs to RxNorm. We compare interactions between NDF-RT and DrugBank and evaluate both sources against a reference list of 360 critical interactions. We compare the interactions detected with NDF-RT and DrugBank on a large prescription dataset. Finally, we contrast NDF-RT and DrugBank against a commercial source. Results DrugBank drug-drug interaction information has limited overlap with NDF-RT (24-30%). The coverage of the reference set by both sources is about 60%. Applied to a prescription dataset of 35.5M pairs of co-prescribed systemic clinical drugs, NDF-RT would have identified 808, 285 interactions, while DrugBank would have identified 1, 170, 693. Of these, 382, 833 are common. The commercial source Multum provides a more systematic coverage (91%) of the reference list. Conclusions This investigation confirms the limited overlap of DDI information between NDF-RT and DrugBank. Additional research is required to determine which source is better, if any. Usage of any of these sources in clinical decision systems should disclose these limitations.
- Is Part Of:
- Journal of biomedical semantics. Volume 6:Issue 1(2015)
- Journal:
- Journal of biomedical semantics
- Issue:
- Volume 6:Issue 1(2015)
- Issue Display:
- Volume 6, Issue 1 (2015)
- Year:
- 2015
- Volume:
- 6
- Issue:
- 1
- Issue Sort Value:
- 2015-0006-0001-0000
- Page Start:
- 1
- Page End:
- 10
- Publication Date:
- 2015-12
- Subjects:
- Drug-drug interactions -- NDF-RT -- DrugBank
Semantics -- Periodicals
Medicine -- Research -- Periodicals
Biology -- Research -- Periodicals
Computer systems -- Periodicals
Bioinformatics -- Periodicals
570.285 - Journal URLs:
- http://www.jbiomedsem.com/ ↗
http://link.springer.com/ ↗ - DOI:
- 10.1186/s13326-015-0018-0 ↗
- Languages:
- English
- ISSNs:
- 2041-1480
- Deposit Type:
- Legaldeposit
- View Content:
- Available online (eLD content is only available in our Reading Rooms) ↗
- Physical Locations:
- British Library DSC - BLDSS-3PM
British Library HMNTS - ELD Digital store - Ingest File:
- 10196.xml