Recent computational methods for white blood cell nuclei segmentation: A comparative study. (May 2019)

• Record Type: Journal Article
• Authors: Andrade, Alan R.; Vogado, Luis H.S.; Veras, Rodrigo de M.S.; Silva, Romuere R.V.; Araujo, Flávio H.D.; Medeiros, Fátima N.S.
• Is Part Of: Computer methods and programs in biomedicine. Volume 173(2019)
• Page Start: 1
• Page End: 14
• Publication Date: 2019-05
• Subjects: Leukocyte -- Segmentation -- Otsu threshold -- Mathematical morphology -- Clustering algorithms; Medicine -- Computer programs -- Periodicals; Biology -- Computer programs -- Periodicals; Computers -- Periodicals; Medicine -- Periodicals; Médecine -- Logiciels -- Périodiques; Biologie -- Logiciels -- Périodiques; Biology -- Computer programs; Medicine -- Computer programs; Periodicals; Electronic journals; 610.28
• DOI: 10.1016/j.cmpb.2019.03.001
• Languages: English
• ISSNs: 0169-2607

Abstract

Highlights: Empirical evaluation of state-of-the-art methods in five completely heterogeneous databases. Identification of the best techniques for white blood cell nuclei segmentation. Clustering, Otsu, arithmetic and region operations are the most used techniques. Many state-of-the-art methods do not obtain good results in low contrast images. Combining clustering techniques with conversion to color systems presented the best results. Abstract: Background and objective: Leukaemia is a disease found worldwide; it is a type of cancer that originates in the bone marrow and is characterised by an abnormal proliferation of white blood cells (leukocytes). In order to correctly identify this abnormality, haematologists examine blood smears from patients. A diagnosis obtained by this method may be influenced by factors such as the experience and level of fatigue of the haematologist, resulting in non-standard reports and even errors. In the literature, several methods have been proposed that involve algorithms to diagnose this disease. However, no reviews or surveys have been conducted. This paper therefore presents an empirical investigation of computational methods focusing on the segmentation of leukocytes. Methods: In our study, 15 segmentation methods were evaluated using five public image databases: ALL-IDB2, BloodSeg, Leukocytes, JTSC Database and CellaVision. Following the standard methodology for literature evaluation, we conducted a pixel-level segmentation evaluation by comparing the segmented image with its corresponding ground truth. In order to identify the strengths and weaknesses of these methods, we performed an evaluation using six evaluation metrics: accuracy, specificity, precision, recall, kappa, Dice, and true positive rate. Results: The segmentation algorithms performed significantly differently for different image databases, and for each database, a different algorithm achieved the best results. Moreover, the two best methods achieved average accuracy values higher than 97%, with an excellent kappa index. Also, the average Dice index indicated that the similarity between the segmented leukocyte and its ground truth was higher than 0.85 for these two methods This result confirms the high level of similarity between these images but does not guarantee that a method has segmented all leukocyte nuclei. We also found that the method that performed best segmented only 58.44% of all leukocytes. Conclusions: Of the techniques used to segment leukocytes, we note that clustering algorithms, the Otsu threshold, simple arithmetic operations and region growing are the approaches most widely used for this purpose. However, these computational methods have not yet overcome all the challenges posed by this problem.