A measure of regularity for polygonal mosaics in biological systems. Issue 1 (December 2015)
- Record Type:
- Journal Article
- Title:
- A measure of regularity for polygonal mosaics in biological systems. Issue 1 (December 2015)
- Main Title:
- A measure of regularity for polygonal mosaics in biological systems
- Authors:
- Contreras-Figueroa, Gabriela
Hernández-Sandoval, Luis
Aragón, José - Abstract:
- Abstract Background The quantification of the spatial order of biological patterns or mosaics provides useful information as many properties are determined by the spatial distribution of their constituent elements. These are usually characterised by methods based on nearest neighbours distances, by the number of sides of cells, or by angles defined by the adjacent cells. Methods A measure of regularity in polygonal mosaics of different kinds in biological systems is proposed. It is based on the condition ofeutacticity, expressed in terms ofeutactic stars, which is closely related to regularity of polytopes. Thus it constitutes a natural measure of regularity. The proposed measure is tested with numerical and real data. Numerically is tested with a hexagonal lattice that is distorted progressively and with a non-periodic regular tiling. With real data, the distribution of oak trees in forests from three locations in the State of Querétaro, Mexico, and the spiral pattern of florets in a flowering plant are characterised. Results The proposed measure performs well and as expected while tested with a numerical experiment, as well as when applied to a known non-periodic tiling of the plane. Concerning real data, the measure is sensitive to the degree of perturbation observed in the distribution of oak trees and detects high regularity in a phyllotactic pattern studied. Conclusions The measure here proposed has a clear geometrical meaning, establishing what regularity means, andAbstract Background The quantification of the spatial order of biological patterns or mosaics provides useful information as many properties are determined by the spatial distribution of their constituent elements. These are usually characterised by methods based on nearest neighbours distances, by the number of sides of cells, or by angles defined by the adjacent cells. Methods A measure of regularity in polygonal mosaics of different kinds in biological systems is proposed. It is based on the condition ofeutacticity, expressed in terms ofeutactic stars, which is closely related to regularity of polytopes. Thus it constitutes a natural measure of regularity. The proposed measure is tested with numerical and real data. Numerically is tested with a hexagonal lattice that is distorted progressively and with a non-periodic regular tiling. With real data, the distribution of oak trees in forests from three locations in the State of Querétaro, Mexico, and the spiral pattern of florets in a flowering plant are characterised. Results The proposed measure performs well and as expected while tested with a numerical experiment, as well as when applied to a known non-periodic tiling of the plane. Concerning real data, the measure is sensitive to the degree of perturbation observed in the distribution of oak trees and detects high regularity in a phyllotactic pattern studied. Conclusions The measure here proposed has a clear geometrical meaning, establishing what regularity means, and constitute an advantageous general purposes alternative to analyse spatial distributions, capable to indicate the degree of regularity of a mosaic or an array of points. … (more)
- Is Part Of:
- Theoretical biology and medical modelling. Volume 12:Issue 1(2015)
- Journal:
- Theoretical biology and medical modelling
- Issue:
- Volume 12:Issue 1(2015)
- Issue Display:
- Volume 12, Issue 1 (2015)
- Year:
- 2015
- Volume:
- 12
- Issue:
- 1
- Issue Sort Value:
- 2015-0012-0001-0000
- Page Start:
- 1
- Page End:
- 12
- Publication Date:
- 2015-12
- Subjects:
- Regularity -- Eutactic stars -- Spatial patterns
Biology -- Mathematical models -- Periodicals
Biology -- Periodicals
Medical sciences -- Periodicals
570.15118 - Journal URLs:
- http://link.springer.com/ ↗
http://www.pubmedcentral.nih.gov/tocrender.fcgi?journal=250 ↗ - DOI:
- 10.1186/s12976-015-0022-1 ↗
- Languages:
- English
- ISSNs:
- 1742-4682
- Deposit Type:
- Legaldeposit
- View Content:
- Available online (eLD content is only available in our Reading Rooms) ↗
- Physical Locations:
- British Library DSC - BLDSS-3PM
British Library HMNTS - ELD Digital store - Ingest File:
- 10028.xml