A data‐mining framework for large scale analysis of dose‐outcome relationships in a database of irradiated head and neck cancer patients. Issue 7 (23rd June 2015)
- Record Type:
- Journal Article
- Title:
- A data‐mining framework for large scale analysis of dose‐outcome relationships in a database of irradiated head and neck cancer patients. Issue 7 (23rd June 2015)
- Main Title:
- A data‐mining framework for large scale analysis of dose‐outcome relationships in a database of irradiated head and neck cancer patients
- Authors:
- Robertson, Scott P.
Quon, Harry
Kiess, Ana P.
Moore, Joseph A.
Yang, Wuyang
Cheng, Zhi
Afonso, Sarah
Allen, Mysha
Richardson, Marian
Choflet, Amanda
Sharabi, Andrew
McNutt, Todd R. - Abstract:
- Abstract : Purpose: To develop a hypothesis‐generating framework for automatic extraction of dose‐outcome relationships from an in‐house, analytic oncology database. Methods: Dose–volume histograms (DVH) and clinical outcomes have been routinely stored to the authors' database for 684 head and neck cancer patients treated from 2007 to 2014. Database queries were developed to extract outcomes that had been assessed for at least 100 patients, as well as DVH curves for organs‐at‐risk (OAR) that were contoured for at least 100 patients. DVH curves for paired OAR (e.g., left and right parotids) were automatically combined and included as additional structures for analysis. For each OAR‐outcome combination, only patients with both OAR and outcome records were analyzed. DVH dose points, D V t, at a given normalized volume threshold Vt were stratified into two groups based on severity of toxicity outcomes after treatment completion. The probability of an outcome was modeled at each Vt = [0%, 1%, …, 100%] by logistic regression. Notable OAR‐outcome combinations were defined as having statistically significant regression parameters ( p < 0.05) and an odds ratio of at least 1.05 (5% increase in odds per Gy). Results: A total of 57 individual and combined structures and 97 outcomes were queried from the database. Of all possible OAR‐outcome combinations, 17% resulted in significant logistic regression fits ( p < 0.05) having an odds ratio of at least 1.05. Further manual inspectionAbstract : Purpose: To develop a hypothesis‐generating framework for automatic extraction of dose‐outcome relationships from an in‐house, analytic oncology database. Methods: Dose–volume histograms (DVH) and clinical outcomes have been routinely stored to the authors' database for 684 head and neck cancer patients treated from 2007 to 2014. Database queries were developed to extract outcomes that had been assessed for at least 100 patients, as well as DVH curves for organs‐at‐risk (OAR) that were contoured for at least 100 patients. DVH curves for paired OAR (e.g., left and right parotids) were automatically combined and included as additional structures for analysis. For each OAR‐outcome combination, only patients with both OAR and outcome records were analyzed. DVH dose points, D V t, at a given normalized volume threshold Vt were stratified into two groups based on severity of toxicity outcomes after treatment completion. The probability of an outcome was modeled at each Vt = [0%, 1%, …, 100%] by logistic regression. Notable OAR‐outcome combinations were defined as having statistically significant regression parameters ( p < 0.05) and an odds ratio of at least 1.05 (5% increase in odds per Gy). Results: A total of 57 individual and combined structures and 97 outcomes were queried from the database. Of all possible OAR‐outcome combinations, 17% resulted in significant logistic regression fits ( p < 0.05) having an odds ratio of at least 1.05. Further manual inspection revealed a number of reasonable models based on either reported literature or proximity between neighboring OARs. The data‐mining algorithm confirmed the following well‐known OAR‐dose/outcome relationships: dysphagia/larynx, voice changes/larynx, esophagitis/esophagus, xerostomia/parotid glands, and mucositis/oral mucosa. Several surrogate relationships, defined as OAR not directly attributed to an outcome, were also observed, including esophagitis/larynx, mucositis/mandible, and xerostomia/mandible. Conclusions: Prospective collection of clinical data has enabled large‐scale analysis of dose‐outcome relationships. The current data‐mining framework revealed both known and novel dosimetric and clinical relationships, underscoring the potential utility of this analytic approach in hypothesis generation. Multivariate models and advanced, 3D dosimetric features may be necessary to further evaluate the complex relationship between neighboring OAR and observed outcomes. … (more)
- Is Part Of:
- Medical physics. Volume 42:Issue 7(2015)
- Journal:
- Medical physics
- Issue:
- Volume 42:Issue 7(2015)
- Issue Display:
- Volume 42, Issue 7 (2015)
- Year:
- 2015
- Volume:
- 42
- Issue:
- 7
- Issue Sort Value:
- 2015-0042-0007-0000
- Page Start:
- 4329
- Page End:
- 4337
- Publication Date:
- 2015-06-23
- Subjects:
- biological organs -- cancer -- data mining -- dosimetry -- medical information systems -- radiation therapy -- regression analysis -- toxicology
Dose‐volume analysis -- Probability theory, stochastic processes, and statistics
Radiation therapy -- Methods or arrangements for processing data by operating upon the order or content of the data handled -- Information retrieval; Database structures therefor -- Scintigraphy -- Health care, e.g. hospitals; Social work -- Patient record management (processing of medical or biological data for scientific purposes G06F19)
dose‐outcome modeling -- toxicity -- head and neck cancer -- large‐scale analytics
Dosimetry -- Databases -- Data analysis -- Computer modeling -- Larynx -- Cancer -- Medical treatment planning -- Collective models -- Statistical analysis
Medical physics -- Periodicals
Medical physics
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610.153 - Journal URLs:
- http://scitation.aip.org/content/aapm/journal/medphys ↗
https://aapm.onlinelibrary.wiley.com/journal/24734209 ↗
http://www.aip.org/ ↗ - DOI:
- 10.1118/1.4922686 ↗
- Languages:
- English
- ISSNs:
- 0094-2405
- Deposit Type:
- Legaldeposit
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- Available online (eLD content is only available in our Reading Rooms) ↗
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- British Library DSC - 5531.130000
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