Genome sequence of strain HIMB624, a cultured representative from the OM43 clade of marine Betaproteobacteria. Issue 1 (January 2012)

• Record Type: Journal Article
• Authors: Huggett, Megan; Hayakawa, Darin; Rappé, Michael
• Is Part Of: Standards in genomic sciences. Volume 6:Issue 1(2012)
• Page Start: 11
• Page End: 20
• Publication Date: 2012-01
• Subjects: methylotroph -- methanol -- OM43 -- marine -- bacterioplankton -- Methylophilaceae; Genomics -- Periodicals; Genomics -- Periodicals; Genomics; Periodicals; 572.8605
• DOI: 10.4056/sigs.2305090
• Languages: English
• ISSNs: 1944-3277

Abstract

Abstract Strain HIMB624 is a planktonic marine bacterium within the familyMethylophilaceae of the classBetaproteobacteria isolated from coastal seawater of Oahu, Hawaii. This strain is of interest because it is one of few known isolates from an abundant clade ofBetaproteobacteria found in cultivation-independent studies of coastal seawater and freshwater environments around the globe, known as OM43. Here we describe some preliminary features of the organism, draft genome sequence and annotation, and comparative genomic analysis with one other sequenced member of this clade (strain HTCC2181). The 1, 333, 209 bp genome of strain HIMB624 is arranged in a single scaffold containing four contigs, and contains 1, 381 protein encoding genes and 39 RNA genes.