Non-contiguous finished genome sequence of plant-growth promoting Serratia proteamaculans S4. Issue 3 (May 2013)

• Record Type: Journal Article
• Authors: Neupane, Saraswoti; Goodwin, Lynne; Högberg, Nils; Kyrpides, Nikos; Alström, Sadhna; Bruce, David; Quintana, Beverly; Munk, Christine; Daligault, Hajnalka; Teshima, Hazuki; Davenport, Karen; Reitenga, Krista; Green, Lance; Chain, Patrick; Erkkila, Tracy; Gu, Wei; Zhang, Xiaojing; Xu, Yan; Kunde, Yulia; Chertkov, Olga; Han, James; Han, Cliff; Detter, John; Ivanova, Natalia; Pati, Amrita; Chen, Amy; Szeto, Ernest; Mavromatis, Kostas; Huntemann, Marcel; Nolan, Matt; Pitluck, Sam; Deshpande, Shweta; Markowitz, Victor; Pagani, Ioanna; Klenk, Hans-Peter; Woyke, Tanja; Finlay, Roger;
• Is Part Of: Standards in genomic sciences. Volume 8:Issue 3(2013)
• Page Start: 441
• Page End: 449
• Publication Date: 2013-05
• Subjects: Facultative aerobe -- gram-negative -- motile -- non-sporulating -- mesophilic -- chemoorganotrophic -- agriculture; Genomics -- Periodicals; Genomics -- Periodicals; Genomics; Periodicals; 572.8605
• DOI: 10.4056/sigs.4027757
• Languages: English
• ISSNs: 1944-3277

Abstract

Abstract Serratia proteamaculans S4 (previouslySerratia sp. S4), isolated from the rhizosphere of wildEquisetum sp., has the ability to stimulate plant growth and to suppress the growth of several soil-borne fungal pathogens of economically important crops. Here we present the non-contiguous, finished genome sequence ofS. proteamaculans S4, which consists of a 5, 324, 944 bp circular chromosome and a 129, 797 bp circular plasmid. The chromosome contains 5, 008 predicted genes while the plasmid comprises 134 predicted genes. In total, 4, 993 genes are assigned as protein-coding genes. The genome consists of 22 rRNA genes, 82 tRNA genes and 58 pseudogenes. This genome is a part of the project "Genomics of four rapeseed plant growth-promoting bacteria with antagonistic effect on plant pathogens" awarded through the 2010 DOE-JGI's Community Sequencing Program.