Draft genome sequence of Fusicladium effusum, cause of pecan scab. Issue 1 (December 2016)

• Record Type: Journal Article
• Authors: Bock, Clive; Chen, Chunxian; Yu, Fahong; Stevenson, Katherine; Wood, Bruce
• Is Part Of: Standards in genomic sciences. Volume 11:Issue 1(2016)
• Page Start: 1
• Page End: 7
• Publication Date: 2016-12
• Subjects: Fusicladium effusum -- Venturiacae -- Fungal pathogen -- Fungicide resistance -- Genetic diversity -- Pecan -- Pecan scab; Genomics -- Periodicals; Genomics -- Periodicals; Genomics; Periodicals; 572.8605
• DOI: 10.1186/s40793-016-0161-y
• Languages: English
• ISSNs: 1944-3277

Abstract

Abstract Pecan scab, caused by the plant pathogenic fungusFusicladium effusum, is the most destructive disease of pecan, an important specialty crop cultivated in several regions of the world. Only a few members of the family Venturiaceae (in which the pathogen resides) have been reported sequenced. We report the first draft genome sequence (40.6 Mb) of an isolateF. effusum collected from a pecan tree (cv. Desirable) in central Georgia, in the US. The genome sequence described will be a useful resource for research of the biology and ecology of the pathogen, coevolution with the pecan host, characterization of genes of interest, and development of markers for studies of genetic diversity, genotyping and phylogenetic analysis. The annotation of the genome is described and a phylogenetic analysis is presented.