Draft genome sequences of Pantoea agglomerans and Pantoea vagans isolates associated with termites. Issue 1 (December 2016)

• Record Type: Journal Article
• Authors: Palmer, Marike; de Maayer, Pieter; Poulsen, Michael; Steenkamp, Emma; van Zyl, Elritha; Coutinho, Teresa; Venter, Stephanus
• Is Part Of: Standards in genomic sciences. Volume 11:Issue 1(2016)
• Page Start: 1
• Page End: 11
• Publication Date: 2016-12
• Subjects: Pantoea -- Bacteria -- Insect -- Symbiosis; Genomics -- Periodicals; Genomics -- Periodicals; Genomics; Periodicals; 572.8605
• DOI: 10.1186/s40793-016-0144-z
• Languages: English
• ISSNs: 1944-3277

Abstract

Abstract The genusPantoea incorporates many economically and clinically important species. The plant-associated species, Pantoea agglomerans andPantoea vagans, are closely related and are often isolated from similar environments. Plasmids conferring certain metabolic capabilities are also shared amongst these two species. The genomes of two isolates obtained from fungus-growing termites in South Africa were sequenced, assembled and annotated. A high number of orthologous genes are conserved within and between these species. The difference in genome size betweenP. agglomerans MP2 (4, 733, 829 bp) andP. vagans MP7 (4, 598, 703 bp) can largely be attributed to the differences in plasmid content. The genome sequences of these isolates may shed light on the common traits that enableP. agglomerans andP. vagans to co-occur in plant- and insect-associated niches.