Genome sequence of the flexirubin-pigmented soil bacterium Niabella soli type strain (JS13-8T). Issue 2 (September 2012)

• Record Type: Journal Article
• Authors: Anderson, Iain; Munk, Christine; Lapidus, Alla; Nolan, Matt; Lucas, Susan; Tice, Hope; Glavina Del Rio, Tijana; Cheng, Jan-Fang; Han, Cliff; Tapia, Roxanne; Goodwin, Lynne; Pitluck, Sam; Liolios, Konstantinos; Mavromatis, Konstantinos; Pagani, Ioanna; Mikhailova, Natalia; Pati, Amrita; Chen, Amy; Palaniappan, Krishna; Land, Miriam; Rohde, Manfred; Tindall, Brian; Göker, Markus; Detter, John; Woyke, Tanja; Bristow, James; Eisen, Jonathan; Markowitz, Victor; Hugenholtz, Philip; Kyrpides, Nikos; Klenk, Hans-Peter; Ivanova, Natalia;
• Is Part Of: Standards in genomic sciences. Volume 7:Issue 2(2012)
• Page Start: 210
• Page End: 220
• Publication Date: 2012-09
• Subjects: aerobic -- non-motile -- Gram-negative -- mesophilic -- chemoorganotrophic -- glycosyl hydrolases -- soil -- Chitinophagaceae -- GEBA; Genomics -- Periodicals; Genomics -- Periodicals; Genomics; Periodicals; 572.8605
• DOI: 10.4056/sigs.3117229
• Languages: English
• ISSNs: 1944-3277

Abstract

Abstract Niabella soli Weonet al. 2008 is a member of theChitinophagaceae, a family within the classSphingobacteriia that is poorly characterized at the genome level, thus far.N. soli strain JS13-8T is of interest for its ability to produce a variety of glycosyl hydrolases. The genome ofN. soli strain JS13-8T is only the second genome sequence of a type strain from the familyChitinophagaceae to be published, and the first one from the genusNiabella . Here we describe the features of this organism, together with the complete genome sequence and annotation. The 4, 697, 343 bp long chromosome with its 3, 931 protein-coding and 49 RNA genes is a part of theG enomic E ncyclopedia of B acteria and A rchaea project.