Radiomics for peripheral zone and intra-prostatic urethra segmentation in MR imaging. (May 2019)

• Record Type: Journal Article
• Authors: Hambarde, Praful; Talbar, Sanjay N.; Sable, Nilesh; Mahajan, Abhishek; Chavan, Satishkumar S.; Thakur, Meenakshi
• Is Part Of: Biomedical signal processing and control. Volume 51(2019)
• Page Start: 19
• Page End: 29
• Publication Date: 2019-05
• Subjects: Peripheral zone of prostate -- Intra-prostatic urethra -- Prostate gland -- Nonnegative matrix factorization -- Self organizing maps -- T2 weighted MR images -- Dice similarity coefficient; Signal processing -- Periodicals; Biomedical engineering -- Periodicals; Signal Processing, Computer-Assisted -- Periodicals; Image Processing, Computer-Assisted -- Periodicals; Biomedical Engineering -- Periodicals; 610.28
• DOI: 10.1016/j.bspc.2019.01.024
• Languages: English
• ISSNs: 1746-8094

Abstract

Highlights: The paper presents a novel approach of automatic segmentation of peripheral zone (PZ) and intra-prostatic urethra in T2w MR images. The technique aids the radiologists for accurate extraction of PZ and precise localization of intra-prostatic urethra. Nonnegative matrix factorization (NMF) is preferred to extract radiomic features of PZ and urethra from prostate region which are used for segmentation using unsupervised learning through self organizing maps (SOMs). The segmentation results are evaluated using dice similarity coefficient (DSC) and validated by radiologists. It is found that the proposed approach of the segmentation provides better DSC and subjective score compared to K-means clustering and fuzzy C-means clustering techniques. Abstract: Automatic peripheral zone (PZ) and intra-prostatic urethra segmentation has clinical significance in analysis of prostate health management. It is interesting and much challenging task due to heterogeneous and inconsistent pixel intensities around prostate boundary and changes in a shape of the actual prostate capsule from patient to patient. The traditional methods of detection and delineation for glandular prostate gland using magnetic resonance imaging (MRI) involve expertise of radiologists and it is expensive in terms of time and accuracy. This paper proposes a novel technique for automate segmentation of PZ of prostate and intra-prostatic urethra. The technique is based on radiomics extraction using nonnegative matrix factorization (NMF) and segmentation using the self organizing maps (SOMs). The proposed framework is evaluated using 52 axial T2 weighted (T2w) MR images. The dice similarity coefficient (DSC) is calculated to measure the similarity between segmentation results and ground truth images. The proposed algorithm is compared with the conventional K-means (KM) clustering and fuzzy C-means (FCM) clustering approaches of the segmentation. The proposed scheme is shown to be superior based on subjective and objective evaluation analysis. The average percentage of DSC for PZ and intra-prostatic urethra segmentation is 87.33% and 85.55%, respectively using the proposed technique.