Architectural roles of Cren7 in folding crenarchaeal chromatin filament. Issue 3 (1st January 2019)

• Record Type: Journal Article
• Authors: Zhang, Zhenfeng; Zhao, Mohan; Chen, Yuanyuan; Wang, Li; Liu, Qinghua; Dong, Yuhui; Gong, Yong; Huang, Li
• Is Part Of: Molecular microbiology. Volume 111:Issue 3(2019)
• Page Start: 556
• Page End: 569
• Publication Date: 2019-01-01
• Subjects: Molecular microbiology -- Periodicals; 572.829
• DOI: 10.1111/mmi.14173
• Languages: English
• ISSNs: 0950-382X

Abstract

Summary: Archaea have evolved various strategies in chromosomal organization. While histone homologues exist in most archaeal phyla, Cren7 is a chromatin protein conserved in the Crenarchaeota. Here, we show that Cren7 preferentially binds DNA with AT‐rich sequences over that with GC‐rich sequences with a binding size of 6~7 bp. Structural studies of Cren7 in complex with either an 18‐bp or a 20‐bp double‐stranded DNA fragment reveal that Cren7 binds to the minor groove of DNA as monomers in a head‐to‐tail manner. The neighboring Cren7 monomers are located on the opposite sides of the DNA duplex, with each introducing a single‐step sharp kink by intercalation of the hydrophobic side chain of Leu28, bending the DNA into an S‐shape conformation. A structural model for the chromatin fiber folded by Cren7 was established and verified by the analysis of cross‐linked Cren7‐DNA complexes by atomic force microscopy. Our results suggest that Cren7 differs significantly from Sul7, another chromatin protein conserved among Sulfolobus species, in both DNA binding and deformation. These data shed significant light on the strategy of chromosomal DNA organization in crenarchaea. Abstract : Cren7 serves critical roles in chromosomal DNA organization in Crenarchaea. Structural studies reveal that Cren7 binds to the minor groove of DNA as monomers in a head‐to‐tail manner with a binding size of ~6 bp. The neighboring Cren7 monomers are located on the opposite sides of the DNA duplex, with each introducing a single‐step sharp kink by intercalation of the hydrophobic side chain of Leu28, bending the DNA into an S‐shape conformation.