253. An accurate and operator independent method for biological tumour volume segmentation. (December 2018)
- Record Type:
- Journal Article
- Title:
- 253. An accurate and operator independent method for biological tumour volume segmentation. (December 2018)
- Main Title:
- 253. An accurate and operator independent method for biological tumour volume segmentation
- Authors:
- Russo, Giorgio
Comelli, Albert
Stefano, Alessandro
Sabini, Maria Gabriella
Ippolito, Massimo
Gilardi, Maria Carla
Yezzi, Anthony - Abstract:
- Abstract : Purpose: The aim of this paper is to develop an operator independent method for biological tumour volume (BTV) delineation from Positron Emission Tomography (PET) images. BTV delineation is challenging because of the low spatial resolution and high noise level in PET images. In addition, BTV varies substantially depending on the method used to segment. Manual delineation is widely-used, but it is strongly user dependent. Methods: The proposed method starts with the automatic identification of the PET slice with maximum Standardized Uptake Value (SUV). Then, a user- independent mask is obtained by a rough pre-segmentation step and it is used to perform the local active contour segmentation on the next slices. When the proposed method finds a slice where the mean SUV on the interior of the delineation contour is greater or equal than the mean SUV on the exterior of the delineation contour, the segmentation is automatically stopped. The algorithm is evaluated on four datasets of synthetic lesions considering different ratios between lesion and background radioactivity concentrations. In this way, the actual lesion volumes are known and the segmentation algorithm is evaluated under different contrast ratio scenarios. In addition, BTVs of 25 patient studies have been manually delineated and compared to the proposed method in order to assess its applicability in a clinical environment. Results: In phantom experiments, dice similarity coefficient (DSC) rate and trueAbstract : Purpose: The aim of this paper is to develop an operator independent method for biological tumour volume (BTV) delineation from Positron Emission Tomography (PET) images. BTV delineation is challenging because of the low spatial resolution and high noise level in PET images. In addition, BTV varies substantially depending on the method used to segment. Manual delineation is widely-used, but it is strongly user dependent. Methods: The proposed method starts with the automatic identification of the PET slice with maximum Standardized Uptake Value (SUV). Then, a user- independent mask is obtained by a rough pre-segmentation step and it is used to perform the local active contour segmentation on the next slices. When the proposed method finds a slice where the mean SUV on the interior of the delineation contour is greater or equal than the mean SUV on the exterior of the delineation contour, the segmentation is automatically stopped. The algorithm is evaluated on four datasets of synthetic lesions considering different ratios between lesion and background radioactivity concentrations. In this way, the actual lesion volumes are known and the segmentation algorithm is evaluated under different contrast ratio scenarios. In addition, BTVs of 25 patient studies have been manually delineated and compared to the proposed method in order to assess its applicability in a clinical environment. Results: In phantom experiments, dice similarity coefficient (DSC) rate and true positive volume fraction (TPVF) rate greater than 90% were observed in synthetic lesions with a diameter greater than 17 mm. In clinical cases, TPVF and DSC were 91.00 ± 7.33% and 85.98 ± 3.40%, respectively. Conclusion: Our method produces accurate segmentation results in phantom studies. In addition, it is feasible in clinical context and shows good accuracy in realistic conditions, reducing any user interaction. … (more)
- Is Part Of:
- Physica medica. Volume 56(2018)Supplement 2
- Journal:
- Physica medica
- Issue:
- Volume 56(2018)Supplement 2
- Issue Display:
- Volume 56, Issue 2 (2018)
- Year:
- 2018
- Volume:
- 56
- Issue:
- 2
- Issue Sort Value:
- 2018-0056-0002-0000
- Page Start:
- 218
- Page End:
- Publication Date:
- 2018-12
- Subjects:
- Medical physics -- Periodicals
Biophysics -- Periodicals
Biophysics -- Periodicals
Imagerie médicale -- Périodiques
Radiothérapie -- Périodiques
Rayons X -- Sécurité -- Mesures -- Périodiques
Physique -- Périodiques
Médecine -- Périodiques
610.153 - Journal URLs:
- http://www.sciencedirect.com/science/journal/11201797 ↗
http://www.clinicalkey.com/dura/browse/journalIssue/11201797 ↗
http://www.clinicalkey.com.au/dura/browse/journalIssue/11201797 ↗
http://www.elsevier.com/journals ↗
http://www.physicamedica.com ↗ - DOI:
- 10.1016/j.ejmp.2018.04.264 ↗
- Languages:
- English
- ISSNs:
- 1120-1797
- Deposit Type:
- Legaldeposit
- View Content:
- Available online (eLD content is only available in our Reading Rooms) ↗
- Physical Locations:
- British Library DSC - 6475.070000
British Library DSC - BLDSS-3PM
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- 9460.xml