Gene expression-based biodosimetry for radiological incidents: assessment of dose and time after radiation exposure. (18th January 2019)
- Record Type:
- Journal Article
- Title:
- Gene expression-based biodosimetry for radiological incidents: assessment of dose and time after radiation exposure. (18th January 2019)
- Main Title:
- Gene expression-based biodosimetry for radiological incidents: assessment of dose and time after radiation exposure
- Authors:
- Macaeva, Ellina
Mysara, Mohamed
De Vos, Winnok H.
Baatout, Sarah
Quintens, Roel - Abstract:
- Abstract: Purpose: In order to ensure efficient use of medical resources following a radiological incident, there is an urgent need for high-throughput time-efficient biodosimetry tools. In the present study, we tested the applicability of a gene expression signature for the prediction of exposure dose as well as the time elapsed since irradiation. Materials and methods: We used whole blood samples from seven healthy volunteers as reference samples (X-ray doses: 0, 25, 50, 100, 500, 1000, and 2000 mGy; time points: 8, 12, 24, 36 and 48 h) and samples from seven other individuals as 'blind samples' (20 samples in total). Results: Gene expression values normalized to the reference gene without normalization to the unexposed controls were sufficient to predict doses with a correlation coefficient between the true and the predicted doses of 0.86. Importantly, we could also classify the samples according to the time since exposure with a correlation coefficient between the true and the predicted time point of 0.96. Because of the dynamic nature of radiation-induced gene expression, this feature will be of critical importance for adequate gene expression-based dose prediction in a real emergency situation. In addition, in this study we also compared different methodologies for RNA extraction available on the market and suggested the one most suitable for emergency situation which does not require on-spot availability of any specific reagents or equipment. Conclusions: Our resultsAbstract: Purpose: In order to ensure efficient use of medical resources following a radiological incident, there is an urgent need for high-throughput time-efficient biodosimetry tools. In the present study, we tested the applicability of a gene expression signature for the prediction of exposure dose as well as the time elapsed since irradiation. Materials and methods: We used whole blood samples from seven healthy volunteers as reference samples (X-ray doses: 0, 25, 50, 100, 500, 1000, and 2000 mGy; time points: 8, 12, 24, 36 and 48 h) and samples from seven other individuals as 'blind samples' (20 samples in total). Results: Gene expression values normalized to the reference gene without normalization to the unexposed controls were sufficient to predict doses with a correlation coefficient between the true and the predicted doses of 0.86. Importantly, we could also classify the samples according to the time since exposure with a correlation coefficient between the true and the predicted time point of 0.96. Because of the dynamic nature of radiation-induced gene expression, this feature will be of critical importance for adequate gene expression-based dose prediction in a real emergency situation. In addition, in this study we also compared different methodologies for RNA extraction available on the market and suggested the one most suitable for emergency situation which does not require on-spot availability of any specific reagents or equipment. Conclusions: Our results represent an important advancement in the application of gene expression for biodosimetry purposes. … (more)
- Is Part Of:
- International journal of radiation biology. Volume 95:Number 1(2019)
- Journal:
- International journal of radiation biology
- Issue:
- Volume 95:Number 1(2019)
- Issue Display:
- Volume 95, Issue 1 (2019)
- Year:
- 2019
- Volume:
- 95
- Issue:
- 1
- Issue Sort Value:
- 2019-0095-0001-0000
- Page Start:
- 64
- Page End:
- 75
- Publication Date:
- 2019-01-18
- Subjects:
- Biodosimetry -- gene expression -- radiation -- time point prediction -- dose prediction
Radiation -- Physiological effect -- Periodicals
Radiobiology -- Periodicals
571.45 - Journal URLs:
- http://www.tandfonline.com/loi/irab20 ↗
http://informahealthcare.com ↗ - DOI:
- 10.1080/09553002.2018.1511926 ↗
- Languages:
- English
- ISSNs:
- 0955-3002
- Deposit Type:
- Legaldeposit
- View Content:
- Available online (eLD content is only available in our Reading Rooms) ↗
- Physical Locations:
- British Library DSC - 4542.517900
British Library DSC - BLDSS-3PM
British Library STI - ELD Digital store - Ingest File:
- 9454.xml