Making sense of ultrahigh‐resolution movement data: A new algorithm for inferring sites of interest. Issue 1 (26th December 2018)

• Record Type: Journal Article
• Authors: Munden, Rhys; Börger, Luca; Wilson, Rory P.; Redcliffe, James; Loison, Anne; Garel, Mathieu; Potts, Jonathan R.
• Is Part Of: Ecology and evolution. Volume 9:Issue 1(2019)
• Page Start: 265
• Page End: 274
• Publication Date: 2018-12-26
• Subjects: animal movement -- biologging -- high‐resolution data -- movement ecology -- site fidelity; Ecology -- Periodicals; Evolution -- Periodicals; 577.05
• DOI: 10.1002/ece3.4721
• Languages: English
• ISSNs: 2045-7758

Abstract

Abstract: Decomposing the life track of an animal into behavioral segments is a fundamental challenge for movement ecology. The proliferation of high‐resolution data, often collected many times per second, offers much opportunity for understanding animal movement. However, the sheer size of modern data sets means there is an increasing need for rapid, novel computational techniques to make sense of these data. Most existing methods were designed with smaller data sets in mind and can thus be prohibitively slow. Here, we introduce a method for segmenting high‐resolution movement trajectories into sites of interest and transitions between these sites. This builds on a previous algorithm of Benhamou and Riotte‐Lambert (2012). Adapting it for use with high‐resolution data. The data's resolution removed the need to interpolate between successive locations, allowing us to increase the algorithm's speed by approximately two orders of magnitude with essentially no drop in accuracy. Furthermore, we incorporate a color scheme for testing the level of confidence in the algorithm's inference (high = green, medium = amber, low = red). We demonstrate the speed and accuracy of our algorithm with application to both simulated and real data (Alpine cattle at 1 Hz resolution). On simulated data, our algorithm correctly identified the sites of interest for 99% of "high confidence" paths. For the cattle data, the algorithm identified the two known sites of interest: a watering hole and a milking station. It also identified several other sites which can be related to hypothesized environmental drivers (e.g., food). Our algorithm gives an efficient method for turning a long, high‐resolution movement path into a schematic representation of broadscale decisions, allowing a direct link to existing point‐to‐point analysis techniques such as optimal foraging theory. It is encoded into anR package calledSitesInterest, so should serve as a valuable tool for making sense of these increasingly large data streams. Abstract : We have constructed a new method for identifying sites of interest, tailored specifically for use with high resolution data. This allows for a complicated movement trajectory to be simplified into a "Markov chain‐like" description of behavioural choices, highlighting the animal's broadscale decisions.