A method for the direct detection of airborne dispersal in lichens. (30th November 2017)

• Record Type: Journal Article
• Authors: Eaton, Sally; Zúñiga, Catalina; Czyzewski, Jakub; Ellis, Christopher; Genney, David R.; Haydon, Daniel; Mirzai, Nosrat; Yahr, Rebecca
• Is Part Of: Molecular ecology resources. Volume 18:Number 2(2018:Mar.)
• Page Start: 240
• Page End: 250
• Publication Date: 2017-11-30
• Subjects: airborne propagules -- ecological genetics -- nested PCR -- rotating arm propagule trap -- species‐specific primers; Molecular ecology -- Periodicals; 572.8
• DOI: 10.1111/1755-0998.12731
• Languages: English
• ISSNs: 1755-098X

Abstract

Abstract: This study sets out a novel method to determine dispersal distances in lichens. Direct measurement of dispersal often remains difficult for lichens and other small inconspicuous species because of the need to track microscopic reproductive propagules, which even if they can be captured, cannot be identified using traditional morphological approaches. A low‐cost device (<£200) was developed to trap the reproductive propagules of lichens, capable of sampling around 0.1 m 3 of air per minute. In parallel, molecular techniques were developed to enable species‐specific detection of propagules caught by the devices, with identification using novel species‐specific primers and optimization of a standard DNA extraction and nested PCR protocol. The methods were tested for both their sensitivity and specificity against a suite of lichen epiphytes, differing in their reproductive mechanisms, dispersal structures and rarity. Sensitivity tests showed that the molecular techniques could detect a single asexual propagule (soredium or isidium), or as few as 10 sexual spores. As proof of concept, propagule traps were deployed into a wooded landscape where the target epiphytes were present. Extractions from deployed propagule traps were sequenced, showing that the method was able to detect the presence of the target species in the atmosphere. As far as we are aware, this is the first attempt to use mechanized propagule traps in combination with DNA diagnostics to detect dispersal of lichens. The tests carried out here point the way for future dispersal studies of lichen epiphytes and other passively dispersed microscopic organisms including fungi or bryophytes.