New MYC IHC Classifier Integrating Quantitative Architecture Parameters to Predict MYC Gene Translocation in Diffuse Large B-Cell Lymphoma. Issue 1 (January 2018)
- Record Type:
- Journal Article
- Title:
- New MYC IHC Classifier Integrating Quantitative Architecture Parameters to Predict MYC Gene Translocation in Diffuse Large B-Cell Lymphoma. Issue 1 (January 2018)
- Main Title:
- New MYC IHC Classifier Integrating Quantitative Architecture Parameters to Predict MYC Gene Translocation in Diffuse Large B-Cell Lymphoma
- Authors:
- Bigras, Gilbert
Dong, Wei-Feng
Canil, Sarah
Lai, Raymond
Morel, Didier
Swanson, Paul E.
Izevbaye, Iyare - Abstract:
- Abstract : A new automated MYC IHC classifier based on bivariate logistic regression is presented. The predictor relies on image analysis developed with the open-source ImageJ platform. From a histologic section immunostained for MYC protein, 2 dimensionless quantitative variables are extracted: (a) relative distance between nuclei positive for MYC IHC based on euclidean minimum spanning tree graph and (b) coefficient of variation of the MYC IHC stain intensity among MYC IHC-positive nuclei. Distance between positive nuclei is suggested to inversely correlate MYC gene rearrangement status, whereas coefficient of variation is suggested to inversely correlate physiological regulation of MYC protein expression. The bivariate classifier was compared with 2 other MYC IHC classifiers (based on percentage of MYC IHC positive nuclei), all tested on 113 lymphomas including mostly diffuse large B-cell lymphomas with known MYC fluorescent in situ hybridization (FISH) status. The bivariate classifier strongly outperformed the "percentage of MYC IHC-positive nuclei" methods to predict MYC + FISH status with 100% sensitivity (95% confidence interval, 94-100) associated with 80% specificity. The test is rapidly performed and might at a minimum provide primary IHC screening for MYC gene rearrangement status in diffuse large B-cell lymphomas. Furthermore, as this bivariate classifier actually predicts "permanent overexpressed MYC protein status, " it might identify nontranslocation-relatedAbstract : A new automated MYC IHC classifier based on bivariate logistic regression is presented. The predictor relies on image analysis developed with the open-source ImageJ platform. From a histologic section immunostained for MYC protein, 2 dimensionless quantitative variables are extracted: (a) relative distance between nuclei positive for MYC IHC based on euclidean minimum spanning tree graph and (b) coefficient of variation of the MYC IHC stain intensity among MYC IHC-positive nuclei. Distance between positive nuclei is suggested to inversely correlate MYC gene rearrangement status, whereas coefficient of variation is suggested to inversely correlate physiological regulation of MYC protein expression. The bivariate classifier was compared with 2 other MYC IHC classifiers (based on percentage of MYC IHC positive nuclei), all tested on 113 lymphomas including mostly diffuse large B-cell lymphomas with known MYC fluorescent in situ hybridization (FISH) status. The bivariate classifier strongly outperformed the "percentage of MYC IHC-positive nuclei" methods to predict MYC + FISH status with 100% sensitivity (95% confidence interval, 94-100) associated with 80% specificity. The test is rapidly performed and might at a minimum provide primary IHC screening for MYC gene rearrangement status in diffuse large B-cell lymphomas. Furthermore, as this bivariate classifier actually predicts "permanent overexpressed MYC protein status, " it might identify nontranslocation-related chromosomal anomalies missed by FISH. … (more)
- Is Part Of:
- Applied immunohistochemistry & molecular morphology. Volume 26:Issue 1(2018)
- Journal:
- Applied immunohistochemistry & molecular morphology
- Issue:
- Volume 26:Issue 1(2018)
- Issue Display:
- Volume 26, Issue 1 (2018)
- Year:
- 2018
- Volume:
- 26
- Issue:
- 1
- Issue Sort Value:
- 2018-0026-0001-0000
- Page Start:
- Page End:
- Publication Date:
- 2018-01
- Subjects:
- MYC -- IHC -- Burkitt lymphoma -- DLBCL -- image analysis -- minimum spanning tree graph
Diagnostic immunohistochemistry -- Periodicals
Immunohistochemistry -- Periodicals
Cells -- Morphology -- Periodicals
Molecular diagnosis -- Periodicals
616.079 - Journal URLs:
- http://journals.lww.com/appliedimmunohist/pages/default.aspx ↗
http://journals.lww.com ↗ - DOI:
- 10.1097/PAI.0000000000000367 ↗
- Languages:
- English
- ISSNs:
- 1541-2016
- Deposit Type:
- Legaldeposit
- View Content:
- Available online (eLD content is only available in our Reading Rooms) ↗
- Physical Locations:
- British Library DSC - 1573.140000
British Library DSC - BLDSS-3PM
British Library STI - ELD Digital store - Ingest File:
- 8732.xml