A proposed framework for consensus-based lung tumour volume auto-segmentation in 4D computed tomography imaging. (22nd January 2015)
- Record Type:
- Journal Article
- Title:
- A proposed framework for consensus-based lung tumour volume auto-segmentation in 4D computed tomography imaging. (22nd January 2015)
- Main Title:
- A proposed framework for consensus-based lung tumour volume auto-segmentation in 4D computed tomography imaging
- Authors:
- Martin, Spencer
Brophy, Mark
Palma, David
Louie, Alexander V
Yu, Edward
Yaremko, Brian
Ahmad, Belal
Barron, John L
Beauchemin, Steven S
Rodrigues, George
Gaede, Stewart - Abstract:
- Abstract: This work aims to propose and validate a framework for tumour volume auto-segmentation based on ground-truth estimates derived from multi-physician input contours to expedite 4D-CT based lung tumour volume delineation. 4D-CT datasets of ten non-small cell lung cancer (NSCLC) patients were manually segmented by 6 physicians. Multi-expert ground truth (GT) estimates were constructed using the STAPLE algorithm for the gross tumour volume (GTV) on all respiratory phases. Next, using a deformable model-based method, multi-expert GT on each individual phase of the 4D-CT dataset was propagated to all other phases providing auto-segmented GTVs and motion encompassing internal gross target volumes (IGTVs) based on GT estimates (STAPLE) from each respiratory phase of the 4D-CT dataset. Accuracy assessment of auto-segmentation employed graph cuts for 3D-shape reconstruction and point-set registration-based analysis yielding volumetric and distance-based measures. STAPLE-based auto-segmented GTV accuracy ranged from (81.51 ± 1.92) to (97.27 ± 0.28)% volumetric overlap of the estimated ground truth. IGTV auto-segmentation showed significantly improved accuracies with reduced variance for all patients ranging from 90.87 to 98.57% volumetric overlap of the ground truth volume. Additional metrics supported these observations with statistical significance. Accuracy of auto-segmentation was shown to be largely independent of selection of the initial propagation phase. IGTVAbstract: This work aims to propose and validate a framework for tumour volume auto-segmentation based on ground-truth estimates derived from multi-physician input contours to expedite 4D-CT based lung tumour volume delineation. 4D-CT datasets of ten non-small cell lung cancer (NSCLC) patients were manually segmented by 6 physicians. Multi-expert ground truth (GT) estimates were constructed using the STAPLE algorithm for the gross tumour volume (GTV) on all respiratory phases. Next, using a deformable model-based method, multi-expert GT on each individual phase of the 4D-CT dataset was propagated to all other phases providing auto-segmented GTVs and motion encompassing internal gross target volumes (IGTVs) based on GT estimates (STAPLE) from each respiratory phase of the 4D-CT dataset. Accuracy assessment of auto-segmentation employed graph cuts for 3D-shape reconstruction and point-set registration-based analysis yielding volumetric and distance-based measures. STAPLE-based auto-segmented GTV accuracy ranged from (81.51 ± 1.92) to (97.27 ± 0.28)% volumetric overlap of the estimated ground truth. IGTV auto-segmentation showed significantly improved accuracies with reduced variance for all patients ranging from 90.87 to 98.57% volumetric overlap of the ground truth volume. Additional metrics supported these observations with statistical significance. Accuracy of auto-segmentation was shown to be largely independent of selection of the initial propagation phase. IGTV construction based on auto-segmented GTVs within the 4D-CT dataset provided accurate and reliable target volumes compared to manual segmentation-based GT estimates. While inter-/intra-observer effects were largely mitigated, the proposed segmentation workflow is more complex than that of current clinical practice and requires further development. … (more)
- Is Part Of:
- Physics in medicine & biology. Volume 60:Number 4(2015:Feb.)
- Journal:
- Physics in medicine & biology
- Issue:
- Volume 60:Number 4(2015:Feb.)
- Issue Display:
- Volume 60, Issue 4 (2015)
- Year:
- 2015
- Volume:
- 60
- Issue:
- 4
- Issue Sort Value:
- 2015-0060-0004-0000
- Page Start:
- 1497
- Page End:
- 1518
- Publication Date:
- 2015-01-22
- Subjects:
- 4D-CT -- STAPLE -- lung cancer
Biophysics -- Periodicals
Medical physics -- Periodicals
610.153 - Journal URLs:
- http://ioppublishing.org/ ↗
http://iopscience.iop.org/0031-9155 ↗ - DOI:
- 10.1088/0031-9155/60/4/1497 ↗
- Languages:
- English
- ISSNs:
- 0031-9155
- Deposit Type:
- Legaldeposit
- View Content:
- Available online (eLD content is only available in our Reading Rooms) ↗
- Physical Locations:
- British Library DSC - BLDSS-3PM
British Library STI - ELD Digital store - Ingest File:
- 8547.xml