HEARTBIT: A Novel Biosignature for Detection of Acute Cellular Rejection of Heart Allografts. (July 2018)
- Record Type:
- Journal Article
- Title:
- HEARTBIT: A Novel Biosignature for Detection of Acute Cellular Rejection of Heart Allografts. (July 2018)
- Main Title:
- HEARTBIT
- Authors:
- Shannon, Casey P
Hollander, Zsuzsanna
Assadian, Sara
Lam, Karen
Chen, Virginia
Dai, LiYing
Zarzycki, Marek
Kim, YoungWoong
Kim, Ji-Young
Balshaw, Robert
Dewi, Ihdina S
Gidlöf, Olof
Öhman, Jenny
Smith, Gustav
Toma, Mustafa
Davies, Ross
Delgado, Diego
Haddad, Haissam
Ignaszewski, Andrew
Isaac, Debra
Kim, Daniel
Mui, Alice
Rajda, Miroslav
West, Lori
White, Michel
Zieroth, Shelley
Tebbutt, Scott J
Keown, Paul
McMaster, Robert
Ng, Raymond T
McManus, Bruce M
… (more) - Abstract:
- Abstract : Background: Acute cellular allograft rejection remains a major cause of limited long-term graft survival in cardiac transplantation. A critical challenge in trying to reduce the incidence of acute cellular rejection arises from the difficulty of accurately and efficiently making diagnoses. The primary approach requires taking small pieces of heart muscle tissue, which is highly invasive and costly, and suffers from sampling error and inter-observer grading variability. Replacing the biopsy with a simple blood test would be of great value to patients and substantially reduce healthcare costs. Approach and Methods: We previously used high-throughput, untargeted transcriptomic profiling in blood samples of heart transplant patients to identify 9 mRNAs and 5 proteins whose combined expression discriminated patients undergoing acute cellular rejection from those who were not. We now validated the mRNA targets on a clinically-amenable NanoString nCounter platform. The performance of the novel assay, HEARTBIT, as well as that of a proteogenomic ensemble including 5 proteins, was assessed by cross-validation. Results: In cross-validation the area under the receiver operating characteristic curve (AUC) of the transcriptomic signature was 0.81, with 47% specificity at ≥ 90% sensitivity. Addition of 5 proteins to the mRNA panel using ensembling resulted in an enhanced performance (AUC of 0.86, with 65% specificity at ≥ 90% sensitivity, in cross-validation). Summary andAbstract : Background: Acute cellular allograft rejection remains a major cause of limited long-term graft survival in cardiac transplantation. A critical challenge in trying to reduce the incidence of acute cellular rejection arises from the difficulty of accurately and efficiently making diagnoses. The primary approach requires taking small pieces of heart muscle tissue, which is highly invasive and costly, and suffers from sampling error and inter-observer grading variability. Replacing the biopsy with a simple blood test would be of great value to patients and substantially reduce healthcare costs. Approach and Methods: We previously used high-throughput, untargeted transcriptomic profiling in blood samples of heart transplant patients to identify 9 mRNAs and 5 proteins whose combined expression discriminated patients undergoing acute cellular rejection from those who were not. We now validated the mRNA targets on a clinically-amenable NanoString nCounter platform. The performance of the novel assay, HEARTBIT, as well as that of a proteogenomic ensemble including 5 proteins, was assessed by cross-validation. Results: In cross-validation the area under the receiver operating characteristic curve (AUC) of the transcriptomic signature was 0.81, with 47% specificity at ≥ 90% sensitivity. Addition of 5 proteins to the mRNA panel using ensembling resulted in an enhanced performance (AUC of 0.86, with 65% specificity at ≥ 90% sensitivity, in cross-validation). Summary and Conclusion: Here, we demonstrate 1) successful translation of biomarker signatures from untargeted high-throughput screening onto a compact, clinically-amenable technological platform, and 2) promising utility of our novel assay, HEARTBIT, for improved detection of acute cellular rejection. … (more)
- Is Part Of:
- Transplantation. Volume 102(2018)Supplement 7S-1
- Journal:
- Transplantation
- Issue:
- Volume 102(2018)Supplement 7S-1
- Issue Display:
- Volume 102, Issue 7, Part 1 (2018)
- Year:
- 2018
- Volume:
- 102
- Issue:
- 7
- Part:
- 1
- Issue Sort Value:
- 2018-0102-0007-0001
- Page Start:
- Page End:
- Publication Date:
- 2018-07
- Subjects:
- Transplantation of organs, tissues, etc -- Periodicals
Transplantation immunology -- Periodicals
617.95 - Journal URLs:
- http://journals.lww.com/pages/default.aspx ↗
- DOI:
- 10.1097/01.tp.0000542821.37563.fb ↗
- Languages:
- English
- ISSNs:
- 0041-1337
- Deposit Type:
- Legaldeposit
- View Content:
- Available online (eLD content is only available in our Reading Rooms) ↗
- Physical Locations:
- British Library DSC - 9024.990000
British Library DSC - BLDSS-3PM
British Library STI - ELD Digital store - Ingest File:
- 7130.xml