Dissection of a Krox20 positive feedback loop driving cell fate choices in hindbrain patterning. Issue 1 (24th September 2013)

• Record Type: Journal Article
• Authors: Bouchoucha, Yassine X; Reingruber, Jürgen; Labalette, Charlotte; Wassef, Michel A; Thierion, Elodie; Desmarquet‐Trin Dinh, Carole; Holcman, David; Gilardi‐Hebenstreit, Pascale; Charnay, Patrick
• Is Part Of: Molecular systems biology. Volume 9:Issue 1(2013)
• Page Start: n/a
• Page End: n/a
• Publication Date: 2013-09-24
• Subjects: Fgf -- Krox20 -- rhombomere -- stochastic model -- transcriptional enhancer; Molecular biology -- Periodicals; Systems biology -- Periodicals; 572.8
• DOI: 10.1038/msb.2013.46
• Languages: English
• ISSNs: 1744-4292

Abstract

Abstract : Although feedback loops are essential in development, their molecular implementation and precise functions remain elusive. Using enhancer knockout in mice, we demonstrate that a direct, positive autoregulatory loop amplifies and maintains the expression of Krox20, a transcription factor governing vertebrate hindbrain segmentation. By combining quantitative data collected in the zebrafish with biophysical modelling that accounts for the intrinsic stochastic molecular dynamics, we dissect the loop at the molecular level. We find that it underpins a bistable switch that turns a transient input signal into cell fate commitment, as we observe in single cell analyses. The stochasticity of the activation process leads to a graded input–output response until saturation is reached. Consequently, the duration and strength of the input signal controls the size of the hindbrain segments by modulating the distribution between the two cell fates. Moreover, segment formation is buffered from severe variations in input level. Finally, the progressive extinction of Krox20 expression involves a destabilization of the loop by repressor molecules. These mechanisms are of general significance for cell type specification and tissue patterning. Abstract : A positive autoregulatory loop required for the expression of the transcription factor Krox20 was dissected using in vivo quantitative data and biophysical modelling to demonstrate how Krox20 controls cell fate decision and rhombomere size in the hindbrain. Synopsis: A positive autoregulatory loop required for the expression of the transcription factor Krox20 was dissected using in vivo quantitative data and biophysical modelling to demonstrate how Krox20 controls cell fate decision and rhombomere size in the hindbrain. Positive autoregulation of Krox20 underpins a bistable switch that turns a transient input signal into cell fate commitment, as demonstrated in single cell analyses. The duration and strength of the input signal control the size of the hindbrain segments by modulating the distribution between two cell fates. The progressive extinction of Krox20 expression involves a destabilization of the loop by repressor molecules.