Database for High Throughput Screening Hits (dHITS): a simple tool to retrieve gene specific phenotypes from systematic screens done in yeast. Issue 7 (3rd May 2018)

• Record Type: Journal Article
• Authors: Chuartzman, Silvia G.; Schuldiner, Maya
• Is Part Of: Yeast. Volume 35:Issue 7(2018:Jul.)
• Page Start: 477
• Page End: 483
• Publication Date: 2018-05-03
• Subjects: database -- deletion library -- dHITS -- GFP library -- phenotype -- Saccharomyces cerevisiae -- systematic screens -- yeast libraries; Yeast -- Periodicals; Yeasts -- Periodicals; Yeasts -- genetics -- Periodicals; Electronic journals; 547
• DOI: 10.1002/yea.3312
• Languages: English
• ISSNs: 0749-503X

Abstract

Abstract: In the last decade several collections of Saccharomyces cerevisiae yeast strains have been created. In these collections every gene is modified in a similar manner such as by a deletion or the addition of a protein tag. Such libraries have enabled a diversity of systematic screens, giving rise to large amounts of information regarding gene functions. However, often papers describing such screens focus on a single gene or a small set of genes and all other loci affecting the phenotype of choice ('hits') are only mentioned in tables that are provided as supplementary material and are often hard to retrieve or search. To help unify and make such data accessible, we have created a Database of High Throughput Screening Hits (dHITS). The dHITS database enables information to be obtained about screens in which genes of interest were found as well as the other genes that came up in that screen – all in a readily accessible and downloadable format. The ability to query large lists of genes at the same time provides a platform to easily analyse hits obtained from transcriptional analyses or other screens. We hope that this platform will serve as a tool to facilitate investigation of protein functions to the yeast community.