Membrane potential and dynamics in a ternary lipid mixture: insights from molecular dynamics simulations. Issue 23 (30th May 2018)
- Record Type:
- Journal Article
- Title:
- Membrane potential and dynamics in a ternary lipid mixture: insights from molecular dynamics simulations. Issue 23 (30th May 2018)
- Main Title:
- Membrane potential and dynamics in a ternary lipid mixture: insights from molecular dynamics simulations
- Authors:
- Lin, Xubo
Nair, Vinay
Zhou, Yong
Gorfe, Alemayehu A. - Abstract:
- Abstract : Transmembrane potential modulates the structure and dynamics of lipid head-groups and acyl chains. Abstract : Transmembrane potential ( V m ) plays critical roles in cell signaling and other functions. However, the impact of V m on the structure and dynamics of membrane lipids and proteins, which are critical for the regulation of signaling, is still an open question. All-atom molecular dynamics (MD) simulation is emerging as a useful technique to address this issue. Previous atomistic MD simulations of pure or binary model membranes indicated that both ion imbalance and electric field can be used to generate V m, but both approaches failed to yield structural changes in lipids with statistical significance. We hypothesized that a possible reason for this could be oversimplified membrane composition or limited sampling. In this work, we tested if and how V m modulates the structure and dynamics of lipids in a physiologically relevant model membrane. Using a detailed side-by-side comparison, we first show that while both ion imbalance and electric field generate V m in our complex membranes, only the latter could produce physiologically relevant V m . We further show that double bonds in lipid acyl chains have a relatively large sensitivity to V m . A single-bilayer model with an electric field showed the highest sensitivity in simulations under the isothermal–isobaric ( NPT ) ensemble, reproducing expected responses of head-group dipoles to V m and suggesting thatAbstract : Transmembrane potential modulates the structure and dynamics of lipid head-groups and acyl chains. Abstract : Transmembrane potential ( V m ) plays critical roles in cell signaling and other functions. However, the impact of V m on the structure and dynamics of membrane lipids and proteins, which are critical for the regulation of signaling, is still an open question. All-atom molecular dynamics (MD) simulation is emerging as a useful technique to address this issue. Previous atomistic MD simulations of pure or binary model membranes indicated that both ion imbalance and electric field can be used to generate V m, but both approaches failed to yield structural changes in lipids with statistical significance. We hypothesized that a possible reason for this could be oversimplified membrane composition or limited sampling. In this work, we tested if and how V m modulates the structure and dynamics of lipids in a physiologically relevant model membrane. Using a detailed side-by-side comparison, we first show that while both ion imbalance and electric field generate V m in our complex membranes, only the latter could produce physiologically relevant V m . We further show that double bonds in lipid acyl chains have a relatively large sensitivity to V m . A single-bilayer model with an electric field showed the highest sensitivity in simulations under the isothermal–isobaric ( NPT ) ensemble, reproducing expected responses of head-group dipoles to V m and suggesting that this approach may be more suitable for studying the structural effects of V m . Our findings also shed light on the relationship between the macroscopic V m and its atomic-level underpinnings. … (more)
- Is Part Of:
- Physical chemistry chemical physics. Volume 20:Issue 23(2018)
- Journal:
- Physical chemistry chemical physics
- Issue:
- Volume 20:Issue 23(2018)
- Issue Display:
- Volume 20, Issue 23 (2018)
- Year:
- 2018
- Volume:
- 20
- Issue:
- 23
- Issue Sort Value:
- 2018-0020-0023-0000
- Page Start:
- 15841
- Page End:
- 15851
- Publication Date:
- 2018-05-30
- Subjects:
- Chemistry, Physical and theoretical -- Periodicals
541.3 - Journal URLs:
- http://pubs.rsc.org/en/journals/journalissues/cp#!issueid=cp016040&type=current&issnprint=1463-9076 ↗
http://www.rsc.org/ ↗ - DOI:
- 10.1039/c8cp01629a ↗
- Languages:
- English
- ISSNs:
- 1463-9076
- Deposit Type:
- Legaldeposit
- View Content:
- Available online (eLD content is only available in our Reading Rooms) ↗
- Physical Locations:
- British Library DSC - 6475.306000
British Library DSC - BLDSS-3PM
British Library STI - ELD Digital store - Ingest File:
- 6877.xml