Discriminatory ability of fractal and grey level co-occurrence matrix methods in structural analysis of hippocampus layers. (7th April 2015)

• Record Type: Journal Article
• Authors: Pantic, Igor; Dacic, Sanja; Brkic, Predrag; Lavrnja, Irena; Jovanovic, Tomislav; Pantic, Senka; Pekovic, Sanja
• Is Part Of: Journal of theoretical biology. Volume 370(2015)
• Page Start: 151
• Page End: 156
• Publication Date: 2015-04-07
• Subjects: Texture -- Variance -- GLCM -- Boundary -- Image; Biology -- Periodicals; Biological Science Disciplines -- Periodicals; Biology -- Periodicals; Biologie -- Périodiques; Theoretische biologie; Biology; Periodicals; 571.05
• DOI: 10.1016/j.jtbi.2015.01.035
• Languages: English
• ISSNs: 0022-5193

Abstract

Abstract: Fractal and grey level co-occurrence matrix (GLCM) analysis represent two mathematical computer-assisted algorithms that are today thought to be able to accurately detect and quantify changes in tissue architecture during various physiological and pathological processes. However, despite their numerous applications in histology and pathology, their sensitivity, specificity and validity regarding evaluation of brain tissue remain unclear. In this article we present the results indicating that certain parameters of fractal and GLCM analysis have high discriminatory ability in distinguishing two morphologically similar regions of rat hippocampus: stratum lacunosum-moleculare and stratum radiatum. Fractal and GLCM algorithms were performed on a total of 240 thionine-stained hippocampus micrographs of 12 male Wistar albino rats. 120 digital micrographs represented stratum lacunosum-moleculare, and another 120 stratum radiatum. For each image, 7 parameters were calculated: fractal dimension, lacunarity, GLCM angular second moment, GLCM contrast, inverse difference moment, GLCM correlation, and GLCM variance. GLCM variance (VAR) resulted in the largest area under the Receiver operating characteristic (ROC) curve of 0.96, demonstrating an outstanding discriminatory power in analysis of stratum lacunosum-moleculare (average VAR equaled 478.1±179.8) and stratum radiatum (average VAR of 145.9±59.2, p <0.0001). For the criterion VAR≤227.5, sensitivity and specificity were 90% and 86.7%, respectively. GLCM correlation as a parameter also produced large area under the ROC curve of 0.95. Our results are in accordance with the findings of our previous study regarding brain white mass fractal and textural analysis. GLCM algorithm as an image analysis method has potentially high applicability in structural analysis of brain tissue cytoarcitecture. Highlights: We analyzed 240 thionine-stained rat hippocampus micrographs. Fractal and GLCM mathematical parameters were calculated for stratum lacunosum-moleculare and stratum radiatum structures. GLCM variance presented outstanding discriminatory power in histological evaluation of these two layers. GLCM algorithm has potentially high applicability in structural analysis of brain tissue cytoarcitecture.