The complete chloroplast genome sequence of Oryza sativa aus-type variety Nagina-22 (Poaceae). Issue 2 (20th December 2017)

• Record Type: Journal Article
• Authors: Yu, Yeisoo; Lee, Hyun-Oh; Chin, Joong Hyoun; Park, Han Yong; Yoo, Soo-Cheul
• Is Part Of: Mitochondrial DNA. Volume 2:Issue 2(2017)
• Page Start: 819
• Page End: 820
• Publication Date: 2017-12-20
• Subjects: Oryza sativa -- aus-type -- Nagina-22 -- N22 -- chloroplast genome -- Poaceae; Mitochondrial DNA -- Periodicals; 572.869
• DOI: 10.1080/23802359.2017.1407710
• Languages: English
• ISSNs: 2380-2359

Abstract

Abstract: Rice ( Oryza sativa ) is the predominant staple food crop belonging to the Poaceae family. In this study, complete chloroplast genome sequence of O. sativa aus -type variety Nagina-22 was characterized through de novo assembly. The genome is a circular DNA molecule of 134, 503 bp and has typical quadripartite structures including large single copy region (80, 548 bp), small single copy region (12, 347 bp), and a pair of inverted repeats (20, 804 bp). A total of 120 genes were predicted in the genome, including 77 protein-coding genes, 8 open reading frame genes, 31 tRNA genes, and 4 rRNA genes. Phylogenetic analysis confirmed a close taxonomical relationship with O. sativa ssp. Indica species.