Photorelaxation of imidazole and adenine via electron-driven proton transfer along H2O wires. (3rd October 2016)
- Record Type:
- Journal Article
- Title:
- Photorelaxation of imidazole and adenine via electron-driven proton transfer along H2O wires. (3rd October 2016)
- Main Title:
- Photorelaxation of imidazole and adenine via electron-driven proton transfer along H2O wires
- Authors:
- Szabla, Rafał
Góra, Robert W.
Janicki, Mikołaj
Šponer, Jiří - Abstract:
- Abstract : Photochemically created πσ* states were classified among the most prominent factors determining the ultrafast radiationless deactivation and photostability of many biomolecular building blocks. In the past two decades, the gas phase photochemistry of πσ* excitations was extensively investigated and was attributed to N–H and O–H bond fission processes. However, complete understanding of the complex photorelaxation pathways of πσ* states in the aqueous environment was very challenging, owing to the direct participation of solvent molecules in the excited-state deactivation. Here, we present non-adiabatic molecular dynamics simulations and potential energy surface calculations of the photoexcited imidazole–(H2 O)5 cluster using the algebraic diagrammatic construction method to the second-order [ADC(2)]. We show that electron driven proton transfer (EDPT) along a wire of at least two water molecules may lead to the formation of a πσ*/S0 state crossing, similarly to what we suggested for 2-aminooxazole. We expand on our previous findings by direct comparison of the imidazole–(H2 O)5 cluster to non-adiabatic molecular dynamics simulations of imidazole in the gas phase, which reveal that the presence of water molecules extends the overall excited-state lifetime of the chromophore. To embed the results in a biological context, we provide calculations of potential energy surface cuts for the analogous photorelaxation mechanism present in adenine, which contains anAbstract : Photochemically created πσ* states were classified among the most prominent factors determining the ultrafast radiationless deactivation and photostability of many biomolecular building blocks. In the past two decades, the gas phase photochemistry of πσ* excitations was extensively investigated and was attributed to N–H and O–H bond fission processes. However, complete understanding of the complex photorelaxation pathways of πσ* states in the aqueous environment was very challenging, owing to the direct participation of solvent molecules in the excited-state deactivation. Here, we present non-adiabatic molecular dynamics simulations and potential energy surface calculations of the photoexcited imidazole–(H2 O)5 cluster using the algebraic diagrammatic construction method to the second-order [ADC(2)]. We show that electron driven proton transfer (EDPT) along a wire of at least two water molecules may lead to the formation of a πσ*/S0 state crossing, similarly to what we suggested for 2-aminooxazole. We expand on our previous findings by direct comparison of the imidazole–(H2 O)5 cluster to non-adiabatic molecular dynamics simulations of imidazole in the gas phase, which reveal that the presence of water molecules extends the overall excited-state lifetime of the chromophore. To embed the results in a biological context, we provide calculations of potential energy surface cuts for the analogous photorelaxation mechanism present in adenine, which contains an imidazole ring in its structure. … (more)
- Is Part Of:
- Faraday discussions. Volume 195(2016)
- Journal:
- Faraday discussions
- Issue:
- Volume 195(2016)
- Issue Display:
- Volume 195, Issue 2016 (2016)
- Year:
- 2016
- Volume:
- 195
- Issue:
- 2016
- Issue Sort Value:
- 2016-0195-2016-0000
- Page Start:
- 237
- Page End:
- 251
- Publication Date:
- 2016-10-03
- Subjects:
- Chemistry -- Periodicals
Metallurgy -- Periodicals
Electrochemistry -- Periodicals
540 - Journal URLs:
- http://pubs.rsc.org/en/journals/journalissues/fd#!issueid=fd016192&type=current&issnprint=1359-6640 ↗
http://www.rsc.org/ ↗ - DOI:
- 10.1039/c6fd00131a ↗
- Languages:
- English
- ISSNs:
- 1359-6640
- Deposit Type:
- Legaldeposit
- View Content:
- Available online (eLD content is only available in our Reading Rooms) ↗
- Physical Locations:
- British Library DSC - 3866.900000
British Library DSC - BLDSS-3PM
British Library STI - ELD Digital store - Ingest File:
- 2069.xml