Energetically favoured defects in dense packings of particles on spherical surfaces. Issue 26 (6th June 2016)
- Record Type:
- Journal Article
- Title:
- Energetically favoured defects in dense packings of particles on spherical surfaces. Issue 26 (6th June 2016)
- Main Title:
- Energetically favoured defects in dense packings of particles on spherical surfaces
- Authors:
- Paquay, Stefan
Kusumaatmaja, Halim
Wales, David J.
Zandi, Roya
van der Schoot, Paul - Abstract:
- Abstract : Basin-hopping and Langevin dynamics calculations reveal that particle packings on curved surfaces can exhibit energetically stabilised defects. Abstract : The dense packing of interacting particles on spheres has proved to be a useful model for virus capsids and colloidosomes. Indeed, icosahedral symmetry observed in virus capsids corresponds to potential energy minima that occur for magic numbers of, e.g., 12, 32 and 72 identical Lennard-Jones particles, for which the packing has exactly the minimum number of twelve five-fold defects. It is unclear, however, how stable these structures are against thermal agitation. We investigate this property by means of basin-hopping global optimisation and Langevin dynamics for particle numbers between ten and one hundred. An important measure is the number and type of point defects, that is, particles that do not have six nearest neighbours. We find that small icosahedral structures are the most robust against thermal fluctuations, exhibiting fewer excess defects and rearrangements for a wide temperature range. Furthermore, we provide evidence that excess defects appearing at low non-zero temperatures lower the potential energy at the expense of entropy. At higher temperatures defects are, as expected, thermally excited and thus entropically stabilised. If we replace the Lennard-Jones potential by a very short-ranged (Morse) potential, which is arguably more appropriate for colloids and virus capsid proteins, we find thatAbstract : Basin-hopping and Langevin dynamics calculations reveal that particle packings on curved surfaces can exhibit energetically stabilised defects. Abstract : The dense packing of interacting particles on spheres has proved to be a useful model for virus capsids and colloidosomes. Indeed, icosahedral symmetry observed in virus capsids corresponds to potential energy minima that occur for magic numbers of, e.g., 12, 32 and 72 identical Lennard-Jones particles, for which the packing has exactly the minimum number of twelve five-fold defects. It is unclear, however, how stable these structures are against thermal agitation. We investigate this property by means of basin-hopping global optimisation and Langevin dynamics for particle numbers between ten and one hundred. An important measure is the number and type of point defects, that is, particles that do not have six nearest neighbours. We find that small icosahedral structures are the most robust against thermal fluctuations, exhibiting fewer excess defects and rearrangements for a wide temperature range. Furthermore, we provide evidence that excess defects appearing at low non-zero temperatures lower the potential energy at the expense of entropy. At higher temperatures defects are, as expected, thermally excited and thus entropically stabilised. If we replace the Lennard-Jones potential by a very short-ranged (Morse) potential, which is arguably more appropriate for colloids and virus capsid proteins, we find that the same particle numbers give a minimum in the potential energy, although for larger particle numbers these minima correspond to different packings. Furthermore, defects are more difficult to excite thermally for the short-ranged potential, suggesting that the short-ranged interaction further stabilises equilibrium structures. … (more)
- Is Part Of:
- Soft matter. Volume 12:Issue 26(2016)
- Journal:
- Soft matter
- Issue:
- Volume 12:Issue 26(2016)
- Issue Display:
- Volume 12, Issue 26 (2016)
- Year:
- 2016
- Volume:
- 12
- Issue:
- 26
- Issue Sort Value:
- 2016-0012-0026-0000
- Page Start:
- 5708
- Page End:
- 5717
- Publication Date:
- 2016-06-06
- Subjects:
- Soft condensed matter -- Periodicals
530.413 - Journal URLs:
- http://www.rsc.org/Publishing/Journals/sm/index.asp ↗
http://www.rsc.org/ ↗ - DOI:
- 10.1039/c6sm00489j ↗
- Languages:
- English
- ISSNs:
- 1744-683X
- Deposit Type:
- Legaldeposit
- View Content:
- Available online (eLD content is only available in our Reading Rooms) ↗
- Physical Locations:
- British Library DSC - 8321.419000
British Library DSC - BLDSS-3PM
British Library STI - ELD Digital store - Ingest File:
- 41.xml