Population genetic structure and identification of loci under selection in the invasive tunicate, Botryllus schlosseri, using newly developed EST-SSRs. (June 2016)
- Record Type:
- Journal Article
- Title:
- Population genetic structure and identification of loci under selection in the invasive tunicate, Botryllus schlosseri, using newly developed EST-SSRs. (June 2016)
- Main Title:
- Population genetic structure and identification of loci under selection in the invasive tunicate, Botryllus schlosseri, using newly developed EST-SSRs
- Authors:
- Lin, Yaping
Zhan, Aibin - Abstract:
- Abstract: Botryllus schlosseri, also known as golden star tunicate, is generally considered of European origin and has successfully invaded coastal waters of all continents except Antarctica. Owing to its significantly negative ecological impacts, it is crucial to understand its dispersal dynamics and mechanisms of invasion success. Here, we identified 1020 microsatellite-containing sequences from 98, 626 expressed sequence tags (ESTs), and developed and characterized 17 polymorphic microsatellites (i.e. EST-SSRs) based on populations both from native (French coast) and invasive ranges (Canadian coast). The number of alleles, observed heterozygosity, and expected heterozygosity ranged from 2 to 12, 0.200 to 0.783, and 0.523 to 0.888 for the French population, and from 2 to 10, 0 to 0.524 and 0.043 to 0.827 for the Canadian population, respectively. We found significant population genetic differentiation between the native and invasive populations (pairwise F ST = 0.1712). Moreover, principal coordinates analysis and Bayesian clustering test suggest long-distance dispersal between distant populations. When all loci were subjected for selection analyses, two loci (BS3244 and BS5339) were under selection based on the LOSITAN test. The results obtained in this study can help understand how ecological and evolutionary processes shape population genetic structure, and further how these processes contribute to invasion success. Highlights: .We developed and characterized 17Abstract: Botryllus schlosseri, also known as golden star tunicate, is generally considered of European origin and has successfully invaded coastal waters of all continents except Antarctica. Owing to its significantly negative ecological impacts, it is crucial to understand its dispersal dynamics and mechanisms of invasion success. Here, we identified 1020 microsatellite-containing sequences from 98, 626 expressed sequence tags (ESTs), and developed and characterized 17 polymorphic microsatellites (i.e. EST-SSRs) based on populations both from native (French coast) and invasive ranges (Canadian coast). The number of alleles, observed heterozygosity, and expected heterozygosity ranged from 2 to 12, 0.200 to 0.783, and 0.523 to 0.888 for the French population, and from 2 to 10, 0 to 0.524 and 0.043 to 0.827 for the Canadian population, respectively. We found significant population genetic differentiation between the native and invasive populations (pairwise F ST = 0.1712). Moreover, principal coordinates analysis and Bayesian clustering test suggest long-distance dispersal between distant populations. When all loci were subjected for selection analyses, two loci (BS3244 and BS5339) were under selection based on the LOSITAN test. The results obtained in this study can help understand how ecological and evolutionary processes shape population genetic structure, and further how these processes contribute to invasion success. Highlights: .We developed and characterized 17 polymorphic EST-SSRs in a highly invasive ascidian Botryllus schlosseri We found significant population differentiation between the native and invasive populations (pairwise F ST = 0.1712). Two microsatellite loci were found to be under selection in tested populations. Ecological and/or evolutionary processes such as local adaptation may explain the observed genetic patterns. … (more)
- Is Part Of:
- Biochemical systematics and ecology. Volume 66(2016)
- Journal:
- Biochemical systematics and ecology
- Issue:
- Volume 66(2016)
- Issue Display:
- Volume 66, Issue 2016 (2016)
- Year:
- 2016
- Volume:
- 66
- Issue:
- 2016
- Issue Sort Value:
- 2016-0066-2016-0000
- Page Start:
- 331
- Page End:
- 336
- Publication Date:
- 2016-06
- Subjects:
- Biological invasion -- Botryllus schlosseri -- Genetic diversity -- Golden star tunicate -- Microsatellite -- Invasive species -- Tunicate
Chemotaxonomy -- Periodicals
Biochemical variation -- Periodicals
Ecology -- Periodicals
Biochemistry -- Periodicals
Ecology -- Periodicals
Chimiotaxinomie -- Périodiques
Variation biochimique -- Périodiques
Écologie -- Périodiques
578.012 - Journal URLs:
- http://www.sciencedirect.com/science/journal/03051978 ↗
http://www.elsevier.com/journals ↗ - DOI:
- 10.1016/j.bse.2016.05.007 ↗
- Languages:
- English
- ISSNs:
- 0305-1978
- Deposit Type:
- Legaldeposit
- View Content:
- Available online (eLD content is only available in our Reading Rooms) ↗
- Physical Locations:
- British Library DSC - 2068.162000
British Library DSC - BLDSS-3PM
British Library HMNTS - ELD Digital store - Ingest File:
- 825.xml