Zonated quantification of steatosis in an entire mouse liver. (1st June 2016)
- Record Type:
- Journal Article
- Title:
- Zonated quantification of steatosis in an entire mouse liver. (1st June 2016)
- Main Title:
- Zonated quantification of steatosis in an entire mouse liver
- Authors:
- Schwen, Lars Ole
Homeyer, André
Schwier, Michael
Dahmen, Uta
Dirsch, Olaf
Schenk, Arne
Kuepfer, Lars
Preusser, Tobias
Schenk, Andrea - Abstract:
- Abstract: Many physiological processes and pathological conditions in livers are spatially heterogeneous, forming patterns at the lobular length scale or varying across the organ. Steatosis, a common liver disease characterized by lipids accumulating in hepatocytes, exhibits heterogeneity at both these spatial scales. The main goal of the present study was to provide a method for zonated quantification of the steatosis patterns found in an entire mouse liver. As an example application, the results were employed in a pharmacokinetics simulation. For the analysis, an automatic detection of the lipid vacuoles was used in multiple slides of histological serial sections covering an entire mouse liver. Lobuli were determined semi-automatically and zones were defined within the lobuli. Subsequently, the lipid content of each zone was computed. The steatosis patterns were found to be predominantly periportal, with a notable organ-scale heterogeneity. The analysis provides a quantitative description of the extent of steatosis in unprecedented detail. The resulting steatosis patterns were successfully used as a perturbation to the liver as part of an exemplary whole-body pharmacokinetics simulation for the antitussive drug dextromethorphan. The zonated quantification is also applicable to other pathological conditions that can be detected in histological images. Besides being a descriptive research tool, this quantification could perspectively complement diagnosis based on visualAbstract: Many physiological processes and pathological conditions in livers are spatially heterogeneous, forming patterns at the lobular length scale or varying across the organ. Steatosis, a common liver disease characterized by lipids accumulating in hepatocytes, exhibits heterogeneity at both these spatial scales. The main goal of the present study was to provide a method for zonated quantification of the steatosis patterns found in an entire mouse liver. As an example application, the results were employed in a pharmacokinetics simulation. For the analysis, an automatic detection of the lipid vacuoles was used in multiple slides of histological serial sections covering an entire mouse liver. Lobuli were determined semi-automatically and zones were defined within the lobuli. Subsequently, the lipid content of each zone was computed. The steatosis patterns were found to be predominantly periportal, with a notable organ-scale heterogeneity. The analysis provides a quantitative description of the extent of steatosis in unprecedented detail. The resulting steatosis patterns were successfully used as a perturbation to the liver as part of an exemplary whole-body pharmacokinetics simulation for the antitussive drug dextromethorphan. The zonated quantification is also applicable to other pathological conditions that can be detected in histological images. Besides being a descriptive research tool, this quantification could perspectively complement diagnosis based on visual assessment of histological images. Abstract : Graphical abstract: Abstract : Highlights: A new spatial quantification shows heterogeneity of liver biomarkers on two scales. Steatosis was assessed in histological serial sections covering an entire mouse liver. The steatosis is distributed periportally with a notable variation across the organ. Steatosis distributions influence results of a whole-body pharmacokinetics simulation. This quantification can complement visual evaluation of histological images. … (more)
- Is Part Of:
- Computers in biology and medicine. Volume 73(2016)
- Journal:
- Computers in biology and medicine
- Issue:
- Volume 73(2016)
- Issue Display:
- Volume 73, Issue 2016 (2016)
- Year:
- 2016
- Volume:
- 73
- Issue:
- 2016
- Issue Sort Value:
- 2016-0073-2016-0000
- Page Start:
- 108
- Page End:
- 118
- Publication Date:
- 2016-06-01
- Subjects:
- CV central vein -- DXM dextromethorphan -- EvG Elastica-van Gieson -- GS glutamine synthetase -- HE hematoxylin & eosin -- PF portal field -- PK pharmacokinetics
Histological serial sections -- Whole-slide scans -- Zonation -- Steatosis -- Dextromethorphan -- Quantitative image analysis -- Pharmacokinetics simulations -- Virtual Liver
Medicine -- Data processing -- Periodicals
Biology -- Data processing -- Periodicals
610.285 - Journal URLs:
- http://www.sciencedirect.com/science/journal/00104825/ ↗
http://www.elsevier.com/journals ↗ - DOI:
- 10.1016/j.compbiomed.2016.04.004 ↗
- Languages:
- English
- ISSNs:
- 0010-4825
- Deposit Type:
- Legaldeposit
- View Content:
- Available online (eLD content is only available in our Reading Rooms) ↗
- Physical Locations:
- British Library DSC - 3394.880000
British Library DSC - BLDSS-3PM
British Library HMNTS - ELD Digital store - Ingest File:
- 721.xml