Adaptive genetic variation distinguishes Chilean blue mussels (Mytilus chilensis) from different marine environments. Issue 11 (26th April 2016)

• Record Type: Journal Article
• Authors: Araneda, Cristián; Larraín, María Angélica; Hecht, Benjamin; Narum, Shawn
• Is Part Of: Ecology and evolution. Volume 6:Issue 11(2016:Jun.)
• Page Start: 3632
• Page End: 3644
• Publication Date: 2016-04-26
• Subjects: assignment tests -- FST outlier -- population structure -- RAD‐seq -- SNP discovery; Ecology -- Periodicals; Evolution -- Periodicals; 577.05
• DOI: 10.1002/ece3.2110
• Languages: English
• ISSNs: 2045-7758

Abstract

Abstract: Chilean mussel populations have been thought to be panmictic with limited genetic structure. Genotyping‐by‐sequencing approaches have enabled investigation of genomewide variation that may better distinguish populations that have evolved in different environments. We investigated neutral and adaptive genetic variation in Mytilus from six locations in southern Chile with 1240 SNPs obtained with RAD‐seq. Differentiation among locations with 891 neutral SNPs was low ( F ST = 0.005). Higher differentiation was obtained with a panel of 58 putative outlier SNPs ( F ST = 0.114) indicating the potential for local adaptation. This panel identified clusters of genetically related individuals and demonstrated that much of the differentiation (~92%) could be attributed to the three major regions and environments: extreme conditions in Patagonia, inner bay influenced by aquaculture (Reloncaví), and outer bay (Chiloé Island). Patagonia samples were most distinct, but additional analysis carried out excluding this collection also revealed adaptive divergence between inner and outer bay samples. The four locations within Reloncaví area were most similar with all panels of markers, likely due to similar environments, high gene flow by aquaculture practices, and low geographical distance. Our results and the SNP markers developed will be a powerful tool supporting management and programs of this harvested species. Abstract : The current study aimed to evaluate the potential of SNP outlier loci to addresses the fine‐scale population structure in Chilean mussel. The SNP marker panels developed here increased assignment of individual to their origin populations and they could be applied for traceability purposes in management and conservation programs.