Proteomic analysis of a compatible interaction between sugarcane and Sporisorium scitamineum. Issue 7 (April 2016)

• Record Type: Journal Article
• Authors: Barnabas, Leonard; Ashwin, N. M. R.; Kaverinathan, K.; Trentin, Anna Rita; Pivato, Micaela; Sundar, A. Ramesh; Malathi, P.; Viswanathan, R.; Rosana, O. B.; Neethukrishna, K.; Carletti, Paolo; Arrigoni, Giorgio; Masi, Antonio; Agrawal, Ganesh Kumar; Rakwal, Randeep
• Is Part Of: Proteomics. Volume 16:Issue 7(2016)
• Page Start: 1111
• Page End: 1122
• Publication Date: 2016-04
• Subjects: Compatible interaction -- Smut -- Sporisorium scitamineum -- Sugarcane -- Plant proteomics; Proteins -- Separation -- Periodicals; Bioinformatics -- Periodicals; Proteomics -- Periodicals; Genomes -- Periodicals; Molecular genetics -- Periodicals; 572.605
• DOI: 10.1002/pmic.201500245
• Languages: English
• ISSNs: 1615-9853

Abstract

Abstract : Smut caused by Sporisorium scitamineum is one of the important diseases of sugarcane with global significance. Despite the intriguing nature of sugarcane, S. scitamineum interaction, several pertinent aspects remain unexplored. This study investigates the proteome level alterations occurring in the meristem of a S. scitamineum infected susceptible sugarcane cultivar at whip emergence stage. Differentially abundant proteins were identified by 2DE coupled with MALDI‐TOF/TOF‐MS. Comprehensively, 53 sugarcane proteins identified were related to defence, stress, metabolism, protein folding, energy, and cell division; in addition, a putative effector of S. scitamineum, chorismate mutase, was identified. Transcript expression vis‐à‐vis the activity of phenylalanine ammonia lyase was relatively higher in the infected meristem. Abundance of seven candidate proteins in 2D gel profiles was in correlation with its corresponding transcript expression levels as validated by qRT‐PCR. Furthermore, this study has opened up new perspectives on the interaction between sugarcane and S. scitamineum .