Application of super‐resolution reconstruction of sparse representation in mass spectrometry imaging. (12th May 2015)

• Record Type: Journal Article
• Authors: Tang, Fei; Bi, Ying; He, Jiuming; Li, Tiegang; Abliz, Zeper; Wang, Xiaohao
• Is Part Of: Rapid communications in mass spectrometry. Volume 29:Number 12(2015)
• Page Start: 1178
• Page End: 1184
• Publication Date: 2015-05-12
• Subjects: Mass spectrometry -- Periodicals; 543.65
• DOI: 10.1002/rcm.7205
• Languages: English
• ISSNs: 0951-4198

Abstract

<abstract abstract-type="main"> <title> <x xml:space="preserve">Abstract</x> </title> <sec id="rcm7205-sec-0001" sec-type="section"> <title>Rationale</title> <p>Mass Spectrometry Imaging (MSI) is useful for analyzing biological samples directly, as a spatially resolved, label‐free technique. Here we present a method for super‐resolution reconstruction of sparse representation to improve resolution of MSI data.</p> </sec> <sec id="rcm7205-sec-0002" sec-type="section"> <title>Methods</title> <p>Air Flow‐Assisted Ionization Mass Spectrometry Imaging (AFAI‐MSI) was used to acquire MSI data from ink samples, thyroid tumour samples, rat renal biopsies, and rat brain biopsy samples. Super‐resolution reconstruction of sparse representation was adopted for the collected MSI data.</p> </sec> <sec id="rcm7205-sec-0003" sec-type="section"> <title>Results</title> <p>After comparison of the reconstructed high‐resolution image and the original high‐resolution image, it is found that super‐resolution reconstruction image is closer to the original high‐resolution image than the image obtained with the interpolation method, and the highest Peak Signal‐to‐Noise Ratio (PSNR) difference value is over 1.4dB. Therefore, the application of the super‐resolution reconstruction technique, based on sparse representation MSI, is feasible and effective.</p> </sec> <sec id="rcm7205-sec-0004" sec-type="section"> <title>Conclusions</title> <p>The method proposed here not only improves the resolution of MSI in post‐data processing, but also acquires fewer sampling points at the same resolution, thereby greatly reducing the sampling time, with great application value for large‐volume sample MSI, high‐resolution MSI, etc. Copyright © 2015 John Wiley & Sons, Ltd.</p> </sec> </abstract>